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== [https://github.com/Bioconductor-mirror Github Mirrors] ==
== [https://github.com/Bioconductor-mirror Github Mirrors] ==
* https://support.bioconductor.org/p/68824/ Announcement
* https://support.bioconductor.org/p/68824/ Announcement
== NIH mirror ==
http://watson.nci.nih.gov/bioc_mirror/. We can safely replace http://www.bioconductor.org/ with http://watson.nci.nih.gov/bioc_mirror/.
For example, the 'Biobase' url in the original and nih mirror can be found in
<pre>
http://www.bioconductor.org/packages/release/bioc/html/Biobase.html
->
http://watson.nci.nih.gov/bioc_mirror/packages/release/bioc/html/Biobase.html
</pre>
and the hgu133plusdb is
<pre>
http://www.bioconductor.org/packages/release/data/annotation/html/hgu133plus2.db.html
->
http://watson.nci.nih.gov/bioc_mirror/packages/release/data/annotation/html/hgu133plus2.db.html
</pre>
and the experiment data package like pasilla
<pre>
http://www.bioconductor.org/packages/release/data/experiment/html/pasilla.html
->
http://watson.nci.nih.gov/bioc_mirror/packages/release/data/experiment/html/pasilla.html
</pre>


== Annotation packages ==
== Annotation packages ==

Revision as of 10:52, 29 June 2015

Github Mirrors

NIH mirror

http://watson.nci.nih.gov/bioc_mirror/. We can safely replace http://www.bioconductor.org/ with http://watson.nci.nih.gov/bioc_mirror/.

For example, the 'Biobase' url in the original and nih mirror can be found in

http://www.bioconductor.org/packages/release/bioc/html/Biobase.html 
-> 
http://watson.nci.nih.gov/bioc_mirror/packages/release/bioc/html/Biobase.html

and the hgu133plusdb is

http://www.bioconductor.org/packages/release/data/annotation/html/hgu133plus2.db.html
->
http://watson.nci.nih.gov/bioc_mirror/packages/release/data/annotation/html/hgu133plus2.db.html

and the experiment data package like pasilla

http://www.bioconductor.org/packages/release/data/experiment/html/pasilla.html
->
http://watson.nci.nih.gov/bioc_mirror/packages/release/data/experiment/html/pasilla.html

Annotation packages

http://bioconductor.org/help/course-materials/2012/SeattleFeb2012/Annotation.pdf

Gene centric

Genomic centric

Web based