Bioconductor: Difference between revisions

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== Workflow ==  
== Workflow ==  
=== [https://www.bioconductor.org/help/workflows/high-throughput-sequencing/ Using Bioconductor for Sequence Data] ===
=== [https://www.bioconductor.org/help/workflows/high-throughput-sequencing/ Using Bioconductor for Sequence Data] ===
== Misc ==
=== Package release history ===
https://support.bioconductor.org/p/69657/
Search the DESCRIPTION file (eg. [https://github.com/Bioconductor/VariantAnnotation/commits/master/DESCRIPTION VariantAnnotation] package) in github and the release information can be found there.

Revision as of 15:58, 10 January 2018

Github Mirrors

BioCExplorer

Explore Bioconductor packages more nicely

source("https://bioconductor.org/biocLite.R")
biocLite("BiocUpgrade")
biocLite("biocViews")
devtools::install_github("seandavi/BiocPkgTools")
devtools::install_github("shians/BioCExplorer")
library(BioCExplorer)
bioc_explore()

BiocExplorer.png

Annotation packages

Gene centric

Genomic centric

Web based

Workflow

Using Bioconductor for Sequence Data

Misc

Package release history

https://support.bioconductor.org/p/69657/

Search the DESCRIPTION file (eg. VariantAnnotation package) in github and the release information can be found there.