Genome: Revision history

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curprev 17:1217:12, 24 March 2022‎ Brb talk contribs‎ 209,862 bytes +205‎ →‎dittoSeq

curprev 11:2611:26, 23 March 2022‎ Brb talk contribs‎ 209,657 bytes +126‎ →‎Merging two gene expression studies; batch effect
curprev 11:2211:22, 23 March 2022‎ Brb talk contribs‎ 209,531 bytes +221‎ →‎Merging two gene expression studies; batch effect

curprev 19:1319:13, 20 March 2022‎ Brb talk contribs‎ 209,310 bytes +429‎ →‎vst over rlog transformation

curprev 16:2416:24, 18 March 2022‎ Brb talk contribs‎ 208,881 bytes +83‎ →‎ssizeRNA

curprev 12:0812:08, 7 March 2022‎ Brb talk contribs‎ 208,798 bytes +343‎ →‎Sample size

curprev 14:2314:23, 12 February 2022‎ Brb talk contribs‎ 207,384 bytes +199‎ →‎mutSignatures: analysis of cancer mutational signatures

curprev 09:4609:46, 11 February 2022‎ Brb talk contribs‎ 207,185 bytes +207‎ →‎Tumor mutational burden

curprev 09:1809:18, 17 January 2022‎ Brb talk contribs‎ 206,978 bytes +129‎ →‎如何自学入门生物信息学

curprev 15:2515:25, 12 January 2022‎ Brb talk contribs‎ 206,849 bytes +205‎ →‎Tell DNA or RNA

curprev 16:0216:02, 11 January 2022‎ Brb talk contribs‎ 206,644 bytes +12‎ →‎Pseudogene
curprev 16:0016:00, 11 January 2022‎ Brb talk contribs‎ 206,632 bytes +238‎ →‎基因结构

curprev 20:3220:32, 8 January 2022‎ Brb talk contribs‎ 204,329 bytes +26‎ →‎Wild type vs mutant

curprev 09:1709:17, 7 January 2022‎ Brb talk contribs‎ 204,303 bytes +855‎ →‎cBioPortal, TCGA, PanCanAtlas
curprev 08:5008:50, 7 January 2022‎ Brb talk contribs‎ 203,448 bytes +221‎ →‎cBioPortal and TCGA

curprev 15:3215:32, 5 January 2022‎ Brb talk contribs‎ 203,227 bytes +69‎ →‎cBioPortal and TCGA
curprev 15:1415:14, 5 January 2022‎ Brb talk contribs‎ 203,158 bytes +404‎ →‎Deep learning
curprev 13:2813:28, 5 January 2022‎ Brb talk contribs‎ 202,754 bytes +264‎ →‎Normalization

curprev 11:0311:03, 2 January 2022‎ Brb talk contribs‎ 202,490 bytes +81‎ →‎5 common genomics file formats
curprev 11:0111:01, 2 January 2022‎ Brb talk contribs‎ 202,409 bytes +13‎ →‎5 common genomics file formats
curprev 10:4610:46, 2 January 2022‎ Brb talk contribs‎ 202,396 bytes +144‎ →‎SAM/Sequence Alignment Format and BAM format specification

curprev 09:0609:06, 24 December 2021‎ Brb talk contribs‎ 202,252 bytes +204‎ →‎Sample size

curprev 09:2509:25, 17 December 2021‎ Brb talk contribs‎ 202,048 bytes +50‎ →‎tximport

curprev 17:5017:50, 16 December 2021‎ Brb talk contribs‎ 201,998 bytes +154‎ →‎Personalized medicine

curprev 22:5922:59, 10 December 2021‎ Brb talk contribs‎ 201,844 bytes +155‎ →‎Ensembl
curprev 10:2810:28, 10 December 2021‎ Brb talk contribs‎ 201,689 bytes +262‎ →‎Selected Papers

curprev 10:4010:40, 2 November 2021‎ Brb talk contribs‎ 194,171 bytes +69‎ →‎如何自学入门生物信息学

curprev 09:5809:58, 1 November 2021‎ Brb talk contribs‎ 194,102 bytes +267‎ →‎isma: analysis of mutations detected by multiple pipelines

curprev 09:5009:50, 26 October 2021‎ Brb talk contribs‎ 193,835 bytes +348‎ →‎in vivo, in vitro, and in situ

curprev 16:0016:00, 24 October 2021‎ Brb talk contribs‎ 193,487 bytes +156‎ →‎proteomics

curprev 09:0809:08, 15 October 2021‎ Brb talk contribs‎ 193,331 bytes +238‎ →‎NCI's Genomic Data Commons (GDC)/TCGA

curprev 21:4721:47, 13 October 2021‎ Brb talk contribs‎ 193,093 bytes +109‎ →‎DNA methylation, Epigenetics
curprev 21:4521:45, 13 October 2021‎ Brb talk contribs‎ 192,984 bytes +199‎ →‎DNA methylation, Epigenetics
curprev 16:2916:29, 13 October 2021‎ Brb talk contribs‎ 192,785 bytes +55‎ →‎CCLE
curprev 13:2313:23, 13 October 2021‎ Brb talk contribs‎ 192,730 bytes +27‎ →‎NCI Proteomic Data Commons

curprev 13:5013:50, 12 October 2021‎ Brb talk contribs‎ 192,703 bytes −15‎ →‎cBioPortal and TCGA

curprev 21:1421:14, 9 October 2021‎ Brb talk contribs‎ 192,718 bytes +283‎ →‎Terms

curprev 11:4211:42, 24 September 2021‎ Brb talk contribs‎ 192,435 bytes +500‎ →‎RPKM, FPKM, TPM and DESeq
curprev 10:2410:24, 24 September 2021‎ Brb talk contribs‎ 191,935 bytes +472‎ →‎RPKM, FPKM, TPM and DESeq

curprev 21:3321:33, 13 September 2021‎ Brb talk contribs‎ 191,463 bytes +183‎ →‎Integrate/combine Omics

curprev 16:3416:34, 30 August 2021‎ Brb talk contribs‎ 191,280 bytes +381‎ →‎Normalization

curprev 12:5312:53, 25 August 2021‎ Brb talk contribs‎ 190,899 bytes +129‎ →‎PDX/Xenograft

curprev 21:3821:38, 19 August 2021‎ Brb talk contribs‎ 190,770 bytes +83‎ →‎Visualization Tags: mobile edit mobile web edit

curprev 16:1216:12, 11 August 2021‎ Brb talk contribs‎ 190,279 bytes +263‎ →‎Integrate/combine Omics
curprev 13:1513:15, 11 August 2021‎ Brb talk contribs‎ 190,016 bytes +204‎ →‎DNA methylation, Epigenetics

curprev 16:2316:23, 10 August 2021‎ Brb talk contribs‎ 189,812 bytes +8‎ →‎DNA methylation, Epigenetics
curprev 16:2216:22, 10 August 2021‎ Brb talk contribs‎ 189,804 bytes +354‎ →‎DNA methylation, Epigenetics
curprev 15:3815:38, 10 August 2021‎ Brb talk contribs‎ 189,450 bytes +28‎ →‎DNA methylation, Epigenetics
curprev 15:3715:37, 10 August 2021‎ Brb talk contribs‎ 189,422 bytes +203‎ →‎DNA methylation, Epigenetics

curprev 14:4014:40, 9 August 2021‎ Brb talk contribs‎ 189,219 bytes +190‎ →‎GSEA

curprev 17:0117:01, 3 August 2021‎ Brb talk contribs‎ 189,029 bytes +976‎ →‎Gene Annotation
curprev 09:4209:42, 3 August 2021‎ Brb talk contribs‎ 188,053 bytes +96‎ →‎vst over rlog transformation
curprev 09:3909:39, 3 August 2021‎ Brb talk contribs‎ 187,957 bytes +169‎ →‎vst over rlog transformation

curprev 12:3712:37, 2 August 2021‎ Brb talk contribs‎ 187,788 bytes +174‎ →‎DNA methylation

curprev 10:4910:49, 29 July 2021‎ Brb talk contribs‎ 187,614 bytes +274‎ →‎vst over rlog transformation
curprev 10:4410:44, 29 July 2021‎ Brb talk contribs‎ 187,340 bytes +97‎ →‎DESeq2 experimental design and interpretation

curprev 16:5616:56, 22 July 2021‎ Brb talk contribs‎ 187,243 bytes +177‎ →‎Fusion gene
curprev 16:4916:49, 22 July 2021‎ Brb talk contribs‎ 187,066 bytes +170‎ →‎Fusion gene
curprev 14:3514:35, 22 July 2021‎ Brb talk contribs‎ 186,896 bytes +120‎ →‎Fusion gene

curprev 09:5009:50, 21 July 2021‎ Brb talk contribs‎ 186,776 bytes +47‎ →‎Fusion gene

curprev 18:4618:46, 26 June 2021‎ Brb talk contribs‎ 186,729 bytes +175‎ →‎Integrate/combine Omics
curprev 18:3418:34, 26 June 2021‎ Brb talk contribs‎ 186,554 bytes +207‎ →‎用DNA做身分鑑識

curprev 12:2512:25, 24 June 2021‎ Brb talk contribs‎ 186,347 bytes +832‎ →‎DESeq2 or edgeR

curprev 17:3317:33, 21 June 2021‎ Brb talk contribs‎ 185,515 bytes +107‎ →‎RPKM (Mortazavi et al. 2008) and cpm (counts per million)
curprev 17:0517:05, 21 June 2021‎ Brb talk contribs‎ 185,408 bytes +122‎ →‎RPKM (Mortazavi et al. 2008) and cpm (counts per million)
curprev 16:5716:57, 21 June 2021‎ Brb talk contribs‎ 185,286 bytes +828‎ →‎RPKM (Mortazavi et al. 2008) and cpm (counts per million)

curprev 13:5713:57, 12 June 2021‎ Brb talk contribs‎ 184,458 bytes +168‎ →‎SRA

curprev 13:4413:44, 1 June 2021‎ Brb talk contribs‎ 184,290 bytes +71‎ →‎Rsubread

curprev 07:2807:28, 28 May 2021‎ Brb talk contribs‎ 184,219 bytes +182‎ →‎modSaRa2

curprev 14:2614:26, 19 May 2021‎ Brb talk contribs‎ 183,226 bytes +98‎ →‎Quantile normalization

curprev 22:0722:07, 12 May 2021‎ Brb talk contribs‎ 183,128 bytes +108‎ →‎DESeq2 or edgeR

curprev 16:3616:36, 11 May 2021‎ Brb talk contribs‎ 183,020 bytes +246‎ →‎RPKM (Mortazavi et al. 2008) and cpm (counts per million)

curprev 13:1113:11, 4 May 2021‎ Brb talk contribs‎ 182,774 bytes +1‎ →‎cBioPortal and TCGA

curprev 09:2009:20, 30 April 2021‎ Brb talk contribs‎ 182,773 bytes +240‎ →‎RPKM, FPKM, TPM and DESeq

curprev 21:4821:48, 29 April 2021‎ Brb talk contribs‎ 182,533 bytes +185‎ →‎RSEM

curprev 07:5607:56, 15 April 2021‎ Brb talk contribs‎ 180,668 bytes +113‎ →‎Normalization

curprev 16:4816:48, 14 April 2021‎ Brb talk contribs‎ 180,555 bytes +85‎ →‎PDX/Xenograft

curprev 13:1413:14, 13 April 2021‎ Brb talk contribs‎ 180,470 bytes +325‎ →‎PDX/Xenograft

curprev 08:2308:23, 8 April 2021‎ Brb talk contribs‎ 180,145 bytes +296‎ →‎Integrate/combine Omics

curprev 10:3110:31, 17 March 2021‎ Brb talk contribs‎ 177,446 bytes +122‎ →‎Integrate/combine Omics

curprev 11:5511:55, 9 March 2021‎ Brb talk contribs‎ 177,324 bytes +1‎ →‎PDX/Xenograft

curprev 11:5211:52, 3 March 2021‎ Brb talk contribs‎ 177,323 bytes +76‎ →‎RSEM

curprev 20:5020:50, 25 February 2021‎ Brb talk contribs‎ 177,247 bytes +195‎ →‎DESeq2 or edgeR

curprev 12:0412:04, 20 February 2021‎ Brb talk contribs‎ 177,052 bytes +147‎ →‎RTCGA

curprev 16:4516:45, 13 February 2021‎ Brb talk contribs‎ 176,905 bytes +407‎ →‎Benchmarking
curprev 10:2910:29, 13 February 2021‎ Brb talk contribs‎ 176,498 bytes +178‎ →‎RNA-Seq workflow

curprev 11:0311:03, 12 February 2021‎ Brb talk contribs‎ 176,320 bytes +36‎ →‎RSEM
curprev 10:5610:56, 12 February 2021‎ Brb talk contribs‎ 176,284 bytes +129‎ →‎RPKM, FPKM, TPM and DESeq
curprev 10:0610:06, 12 February 2021‎ Brb talk contribs‎ 176,155 bytes +207‎ →‎Normalization

curprev 14:3014:30, 8 February 2021‎ Brb talk contribs‎ 175,948 bytes +164‎ →‎RNA vs DNA

curprev 11:3111:31, 1 February 2021‎ Brb talk contribs‎ 175,784 bytes +242‎ →‎DESeq2 or edgeR

curprev 16:2816:28, 29 January 2021‎ Brb talk contribs‎ 175,542 bytes +34‎ →‎Partek

curprev 21:4721:47, 27 January 2021‎ Brb talk contribs‎ 175,508 bytes +125‎ →‎Time course experiment

curprev 17:3917:39, 25 January 2021‎ Brb talk contribs‎ 172,825 bytes +514‎ →‎RSEM
curprev 16:5616:56, 25 January 2021‎ Brb talk contribs‎ 172,311 bytes +71‎ →‎RSEM
curprev 15:3215:32, 25 January 2021‎ Brb talk contribs‎ 172,240 bytes +328‎ →‎RSEM

curprev 13:4713:47, 12 January 2021‎ Brb talk contribs‎ 170,930 bytes +317‎ →‎Normalization

curprev 12:1812:18, 19 December 2020‎ Brb talk contribs‎ 170,613 bytes +179‎ →‎RNA vs DNA

curprev 17:4617:46, 17 December 2020‎ Brb talk contribs‎ 170,434 bytes +1‎ →‎RNA vs DNA
curprev 17:4617:46, 17 December 2020‎ Brb talk contribs‎ 170,433 bytes +91‎ →‎RNA vs DNA

curprev 11:0211:02, 16 December 2020‎ Brb talk contribs‎ 170,342 bytes +465‎ →‎RNA vs DNA

curprev 14:3514:35, 15 December 2020‎ Brb talk contribs‎ 169,877 bytes +260‎ →‎SeqMonk
curprev 14:3414:34, 15 December 2020‎ Brb talk contribs‎ 169,617 bytes +284‎ →‎Pipeline

curprev 21:4421:44, 1 December 2020‎ Brb talk contribs‎ 169,333 bytes +43‎ →‎Nextflow
curprev 21:4021:40, 1 December 2020‎ Brb talk contribs‎ 169,290 bytes +152‎ →‎GeneTEFlow

curprev 19:0419:04, 24 November 2020‎ Brb talk contribs‎ 169,138 bytes +209‎ →‎tidybulk
curprev 18:3818:38, 24 November 2020‎ Brb talk contribs‎ 168,929 bytes +110‎ →‎cBioPortal and TCGA
curprev 17:5417:54, 24 November 2020‎ Brb talk contribs‎ 168,819 bytes +93‎ →‎Integrate/combine Omics

curprev 17:2817:28, 20 November 2020‎ Brb talk contribs‎ 168,726 bytes +158‎ →‎in vivo
curprev 17:2717:27, 20 November 2020‎ Brb talk contribs‎ 168,568 bytes +171‎ →‎in vitro

curprev 22:5422:54, 11 November 2020‎ Brb talk contribs‎ 168,397 bytes +27‎ →‎TMM (Robinson and Oshlack, 2010)
curprev 22:0722:07, 11 November 2020‎ Brb talk contribs‎ 168,370 bytes +128‎ →‎TMM (Robinson and Oshlack, 2010)
curprev 22:0322:03, 11 November 2020‎ Brb talk contribs‎ 168,242 bytes +84‎ →‎TMM (Robinson and Oshlack, 2010)
curprev 18:2718:27, 11 November 2020‎ Brb talk contribs‎ 168,158 bytes +115‎ →‎TMM (Robinson and Oshlack, 2010)

curprev 16:1016:10, 9 November 2020‎ Brb talk contribs‎ 168,043 bytes +151‎ →‎tximport

curprev 14:3214:32, 6 November 2020‎ Brb talk contribs‎ 166,527 bytes +95‎ →‎Variant simulator

curprev 09:3809:38, 5 November 2020‎ Brb talk contribs‎ 166,432 bytes −12‎ →‎PDX/Xenograft
curprev 09:3709:37, 5 November 2020‎ Brb talk contribs‎ 166,444 bytes +172‎ →‎PDX/Xenograft

curprev 12:0512:05, 3 November 2020‎ Brb talk contribs‎ 166,272 bytes +186‎ →‎GEO

curprev 11:3611:36, 2 November 2020‎ Brb talk contribs‎ 166,086 bytes +166‎ →‎RSEM

curprev 20:2020:20, 31 October 2020‎ Brb talk contribs‎ 165,920 bytes +44‎ →‎Tumor mutational burden
curprev 20:1920:19, 31 October 2020‎ Brb talk contribs‎ 165,876 bytes +256‎ →‎Tumor mutational burden
curprev 18:4418:44, 31 October 2020‎ Brb talk contribs‎ 165,620 bytes +95‎ →‎CRAN packages

curprev 15:0715:07, 28 October 2020‎ Brb talk contribs‎ 165,525 bytes +143‎ →‎cBioPortal and TCGA
curprev 14:5014:50, 28 October 2020‎ Brb talk contribs‎ 165,382 bytes +236‎ →‎cBioPortal and TCGA
curprev 14:2914:29, 28 October 2020‎ Brb talk contribs‎ 165,146 bytes +94‎ →‎cBioPortal and TCGA
curprev 14:0214:02, 28 October 2020‎ Brb talk contribs‎ 165,052 bytes +214‎ →‎cBioPortal and TCGA

curprev 20:1920:19, 21 October 2020‎ Brb talk contribs‎ 164,838 bytes +1‎ →‎NCI Protemic Data Commons
curprev 20:1920:19, 21 October 2020‎ Brb talk contribs‎ 164,837 bytes +61‎ →‎NCI's Genomic Data Commons (GDC)/TCGA

curprev 11:0911:09, 20 October 2020‎ Brb talk contribs‎ 164,776 bytes +614‎ →‎Sharing data

curprev 20:1820:18, 16 October 2020‎ Brb talk contribs‎ 164,162 bytes +187‎ →‎RPKM, FPKM, TPM and DESeq
curprev 17:2717:27, 16 October 2020‎ Brb talk contribs‎ 163,975 bytes +219‎ →‎TMM (Robinson and Oshlack, 2010)
curprev 15:4115:41, 16 October 2020‎ Brb talk contribs‎ 163,756 bytes +379‎ →‎TMM (Robinson and Oshlack, 2010)

curprev 17:3517:35, 15 October 2020‎ Brb talk contribs‎ 163,377 bytes +37‎ →‎Normalization

curprev 15:3615:36, 9 October 2020‎ Brb talk contribs‎ 163,340 bytes +305‎ →‎CCBR Exome Pipeliner

curprev 13:0913:09, 8 October 2020‎ Brb talk contribs‎ 163,035 bytes +206‎ →‎Variant simulator
curprev 13:0113:01, 8 October 2020‎ Brb talk contribs‎ 162,829 bytes +187‎ →‎BAGSE

curprev 21:4421:44, 6 October 2020‎ Brb talk contribs‎ 162,642 bytes +168‎ →‎DESeq or edgeR
curprev 13:4713:47, 6 October 2020‎ Brb talk contribs‎ 162,474 bytes +146‎ →‎Normalization

curprev 17:0617:06, 1 October 2020‎ Brb talk contribs‎ 158,355 bytes +163‎ →‎About the KEGG pathways
curprev 17:0217:02, 1 October 2020‎ Brb talk contribs‎ 158,192 bytes +337‎ →‎GSOAP
curprev 16:1416:14, 1 October 2020‎ Brb talk contribs‎ 157,855 bytes +91‎ →‎Books

curprev 12:2912:29, 28 September 2020‎ Brb talk contribs‎ 157,764 bytes +232‎ →‎Normalization
curprev 12:2212:22, 28 September 2020‎ Brb talk contribs‎ 157,532 bytes +286‎ →‎EBSeq

curprev 21:3921:39, 16 September 2020‎ Brb talk contribs‎ 157,246 bytes +486‎ →‎RNA-Seq workflow

curprev 08:4208:42, 15 September 2020‎ Brb talk contribs‎ 156,760 bytes +177‎ →‎ReportingTools
curprev 08:3508:35, 15 September 2020‎ Brb talk contribs‎ 156,583 bytes +51‎ →‎ReportingTools
curprev 08:0408:04, 15 September 2020‎ Brb talk contribs‎ 156,532 bytes +83‎ →‎RNA sequencing 101

curprev 14:5514:55, 14 September 2020‎ Brb talk contribs‎ 156,449 bytes +93‎ →‎Normalization
curprev 12:4012:40, 14 September 2020‎ Brb talk contribs‎ 156,356 bytes +121‎ →‎ReportingTools
curprev 09:1409:14, 14 September 2020‎ Brb talk contribs‎ 156,235 bytes +188‎ →‎基因结构

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