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== Ingenuity ==
== Ingenuity ==


Features:
* easily search the scientific literature
* easily search the scientific literature
* build dynamic pathway models
* build dynamic pathway models
* quickly analyze experimental data
* quickly analyze experimental data
* share research and collaborate
* share research and collaborate
* http://people.mbi.ohio-state.edu/baguda/PathwayAnalysis/
* IPA 5.5 manual http://people.mbi.ohio-state.edu/baguda/PathwayAnalysis/ipa_help_manual_5.5_v1.pdf


Entry points
<pre>
<pre>
Expression data -> New core analysis -> Functions/Diseases -> Network analysis
Expression data -> New core analysis -> Functions/Diseases -> Network analysis
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Creating a custom pathway --------------------+
Creating a custom pathway --------------------+
</pre>
</pre>
Resource:
* http://people.mbi.ohio-state.edu/baguda/PathwayAnalysis/
* IPA 5.5 manual http://people.mbi.ohio-state.edu/baguda/PathwayAnalysis/ipa_help_manual_5.5_v1.pdf
Login:
https://analysis.ingenuity.com/pa/launch.jsp


== [http://david.abcc.ncifcrf.gov/ DAVID Bioinformatics Resource] ==
== [http://david.abcc.ncifcrf.gov/ DAVID Bioinformatics Resource] ==

Revision as of 10:29, 5 March 2013

RNA seq

Other software

dCHIP

Ingenuity

Features:

  • easily search the scientific literature
  • build dynamic pathway models
  • quickly analyze experimental data
  • share research and collaborate

Entry points

Expression data -> New core analysis -> Functions/Diseases -> Network analysis
                                        Canonical pathways        |
                                              |                   |
Simple or advanced search --------------------+                   |
                                              |                   |
                                              v                   |
                                        My pathways, Lists <------+
                                              ^
                                              |
Creating a custom pathway --------------------+

Resource:


Login: https://analysis.ingenuity.com/pa/launch.jsp

DAVID Bioinformatics Resource