NGS: Revision history

View logs for this page

Jump to navigation Jump to search

Diff selection: Mark the radio buttons of the revisions to compare and hit enter or the button at the bottom.
Legend: (cur) = difference with latest revision, (prev) = difference with preceding revision, m = minor edit.

curprev 11:3511:35, 15 August 2023‎ Brb talk contribs‎ 179,113 bytes +124‎ →‎Automation/interactive, workflow

curprev 14:4114:41, 6 June 2023‎ Brb talk contribs‎ 178,989 bytes +190‎ →‎Microbiome

curprev 08:2608:26, 15 March 2023‎ Brb talk contribs‎ 178,799 bytes +251‎ →‎RNA-Seq vs microarray
curprev 08:1808:18, 15 March 2023‎ Brb talk contribs‎ 178,548 bytes +107‎ →‎RNA-Seq vs microarray

curprev 07:1307:13, 24 June 2022‎ Brb talk contribs‎ 178,441 bytes +182‎ →‎Automation/interactive, workflow

curprev 16:0016:00, 16 June 2022‎ Brb talk contribs‎ 178,259 bytes +122‎ →‎Co-expression in RNA-Seq
curprev 13:5213:52, 16 June 2022‎ Brb talk contribs‎ 178,137 bytes +180‎ →‎Co-expression in RNA-Seq
curprev 13:4113:41, 16 June 2022‎ Brb talk contribs‎ 177,957 bytes +846‎ →‎Co-expression in RNA-Seq

curprev 14:2414:24, 23 January 2022‎ Brb talk contribs‎ 177,111 bytes +166‎ →‎How to know that your RNA-seq is stranded or not?

curprev 18:3718:37, 1 January 2022‎ Brb talk contribs‎ 176,945 bytes +211‎ →‎PCA on genotypes
curprev 18:3018:30, 1 January 2022‎ Brb talk contribs‎ 176,734 bytes +151‎ →‎PCA on genotypes
curprev 17:3117:31, 1 January 2022‎ Brb talk contribs‎ 176,583 bytes +172‎ →‎Adding/removing 'chr' to/from vcf files

curprev 14:5414:54, 29 December 2021‎ Brb talk contribs‎ 176,411 bytes +217‎ →‎Automation/interactive, workflow

curprev 10:0310:03, 27 December 2021‎ Brb talk contribs‎ 176,194 bytes +15‎ →‎log-ratios, compositional data data
curprev 10:0010:00, 27 December 2021‎ Brb talk contribs‎ 176,179 bytes +20‎ →‎log-ratios data
curprev 10:0010:00, 27 December 2021‎ Brb talk contribs‎ 176,159 bytes +158‎ →‎ideal: a shiny app

curprev 08:5408:54, 24 December 2021‎ Brb talk contribs‎ 176,001 bytes +97‎ →‎How to know that your RNA-seq is stranded or not?

curprev 09:4609:46, 15 December 2021‎ Brb talk contribs‎ 175,904 bytes +663‎ →‎Single Cell RNA-Seq

curprev 19:4719:47, 11 December 2021‎ Brb talk contribs‎ 175,241 bytes +28‎ →‎Automation/interactive, workflow
curprev 19:4519:45, 11 December 2021‎ Brb talk contribs‎ 175,213 bytes +108‎ →‎Automation/interactive, workflow

curprev 10:4710:47, 29 November 2021‎ Brb talk contribs‎ 175,105 bytes +168‎ →‎Automation/interactive, workflow

curprev 10:3110:31, 26 November 2021‎ Brb talk contribs‎ 174,937 bytes +190‎ →‎Copy number alternations

curprev 10:1010:10, 1 October 2021‎ Brb talk contribs‎ 174,747 bytes +338‎ →‎Biowulf
curprev 10:0810:08, 1 October 2021‎ Brb talk contribs‎ 174,409 bytes +785‎ →‎STARindex folder

curprev 09:5309:53, 9 September 2021‎ Brb talk contribs‎ 173,624 bytes +114‎ →‎Alignment and Indexing

curprev 12:5712:57, 21 August 2021‎ Brb talk contribs‎ 173,510 bytes +243‎ →‎RNA-Seq analysis interface

curprev 22:1122:11, 12 August 2021‎ Brb talk contribs‎ 173,267 bytes +226‎ →‎Automation/interactive, workflow

curprev 08:5008:50, 3 August 2021‎ Brb talk contribs‎ 173,041 bytes +215‎ →‎RNA-Seq vs microarray

curprev 16:2316:23, 22 July 2021‎ Brb talk contribs‎ 172,826 bytes +203‎ →‎Workflow

curprev 16:4916:49, 18 June 2021‎ Brb talk contribs‎ 172,623 bytes +187‎ →‎Co-expression in RNA-Seq

curprev 18:5518:55, 3 June 2021‎ Brb talk contribs‎ 172,436 bytes +141‎ →‎Automation/interactive

curprev 12:4312:43, 28 May 2021‎ Brb talk contribs‎ 172,295 bytes +190‎ →‎How to know that your RNA-seq is stranded or not?

curprev 19:3419:34, 25 May 2021‎ Brb talk contribs‎ 172,105 bytes +157‎ →‎Introduction to Sequence Data Analysis

curprev 09:1109:11, 26 March 2021‎ Brb talk contribs‎ 171,948 bytes +155‎ →‎Co-expression in RNA-Seq

curprev 14:5814:58, 1 March 2021‎ Brb talk contribs‎ 171,543 bytes −21,637‎ →‎Single Cell RNA-Seq

curprev 21:1521:15, 25 February 2021‎ Brb talk contribs‎ 193,180 bytes +152‎ →‎Cell type annotation
curprev 20:3820:38, 25 February 2021‎ Brb talk contribs‎ 193,028 bytes +146‎ →‎Co-expression in RNA-Seq
curprev 20:3120:31, 25 February 2021‎ Brb talk contribs‎ 192,882 bytes +269‎ →‎Cell type annotation
curprev 12:1412:14, 25 February 2021‎ Brb talk contribs‎ 192,613 bytes +383‎ →‎QC

curprev 21:2921:29, 19 February 2021‎ Brb talk contribs‎ 190,832 bytes +121‎ →‎Normalization
curprev 21:1921:19, 19 February 2021‎ Brb talk contribs‎ 190,711 bytes +273‎ →‎Spike-in

curprev 21:3421:34, 18 February 2021‎ Brb talk contribs‎ 190,438 bytes +146‎ →‎Single Cell RNA-Seq
curprev 21:3221:32, 18 February 2021‎ Brb talk contribs‎ 190,292 bytes +112‎ →‎Single Cell RNA-Seq

curprev 16:4916:49, 17 February 2021‎ Brb talk contribs‎ 190,180 bytes +241‎ →‎Public data
curprev 15:3115:31, 17 February 2021‎ Brb talk contribs‎ 189,939 bytes +400‎ →‎Single Cell RNA-Seq

curprev 18:4018:40, 15 February 2021‎ Brb talk contribs‎ 189,539 bytes +101‎ →‎Integration datasets
curprev 18:0618:06, 15 February 2021‎ Brb talk contribs‎ 189,438 bytes +286‎ →‎Seurat*
curprev 11:2711:27, 15 February 2021‎ Brb talk contribs‎ 189,152 bytes +1,104‎ →‎Seurat*
curprev 11:1611:16, 15 February 2021‎ Brb talk contribs‎ 188,048 bytes +124‎ →‎Seurat*

curprev 22:2522:25, 14 February 2021‎ Brb talk contribs‎ 187,924 bytes +172‎ →‎Cell type deconvolution

curprev 10:4210:42, 13 February 2021‎ Brb talk contribs‎ 187,752 bytes +122‎ →‎Bioconductor packages
curprev 10:4010:40, 13 February 2021‎ Brb talk contribs‎ 187,630 bytes +149‎ →‎Public data

curprev 14:2914:29, 12 February 2021‎ Brb talk contribs‎ 187,481 bytes +670‎ →‎Mitochondrion
curprev 12:3312:33, 12 February 2021‎ Brb talk contribs‎ 186,811 bytes +409‎ →‎Mitochondrion

curprev 19:1719:17, 9 February 2021‎ Brb talk contribs‎ 181,752 bytes +98‎ →‎Single Cell RNA-Seq

curprev 15:2415:24, 8 February 2021‎ Brb talk contribs‎ 181,654 bytes +237‎ →‎Seurat*
curprev 15:1415:14, 8 February 2021‎ Brb talk contribs‎ 181,417 bytes +198‎ →‎Seurat*
curprev 15:1115:11, 8 February 2021‎ Brb talk contribs‎ 181,219 bytes +548‎ →‎Seurat*
curprev 15:0915:09, 8 February 2021‎ Brb talk contribs‎ 180,671 bytes +430‎ →‎Seurat*

curprev 17:4417:44, 7 February 2021‎ Brb talk contribs‎ 180,241 bytes +60‎ →‎CPM and glmpca package

curprev 16:5316:53, 5 February 2021‎ Brb talk contribs‎ 180,181 bytes +76‎ →‎Batch correction
curprev 16:4716:47, 5 February 2021‎ Brb talk contribs‎ 180,105 bytes +152‎ →‎scone package: normalization

curprev 15:5215:52, 31 January 2021‎ Brb talk contribs‎ 179,253 bytes −4‎ →‎Single Cell RNA-Seq
curprev 15:5015:50, 31 January 2021‎ Brb talk contribs‎ 179,257 bytes +34‎ →‎Single Cell RNA-Seq
curprev 14:2214:22, 31 January 2021‎ Brb talk contribs‎ 179,223 bytes +285‎ →‎Single Cell RNA-Seq

curprev 09:3209:32, 27 January 2021‎ Brb talk contribs‎ 178,938 bytes +107‎ →‎Bioconductor packages

curprev 16:2116:21, 22 January 2021‎ Brb talk contribs‎ 178,455 bytes −7‎ →‎Bioconductor packages
curprev 16:1216:12, 22 January 2021‎ Brb talk contribs‎ 178,462 bytes 0‎ →‎Bioconductor packages
curprev 16:0916:09, 22 January 2021‎ Brb talk contribs‎ 178,462 bytes +179‎ →‎Bioconductor packages
curprev 15:5915:59, 22 January 2021‎ Brb talk contribs‎ 178,283 bytes +938‎ →‎Public data

curprev 11:5111:51, 19 January 2021‎ Brb talk contribs‎ 177,345 bytes +131‎ →‎Seurat*
curprev 11:2611:26, 19 January 2021‎ Brb talk contribs‎ 177,214 bytes +131‎ →‎Public data
curprev 10:5410:54, 19 January 2021‎ Brb talk contribs‎ 177,083 bytes +189‎ →‎Single Cell RNA-Seq

curprev 09:2609:26, 11 January 2021‎ Brb talk contribs‎ 176,894 bytes +53‎ →‎Introduction to Sequence Data Analysis

curprev 20:3420:34, 29 December 2020‎ Brb talk contribs‎ 176,841 bytes +163‎ →‎Single Cell RNA-Seq
curprev 20:2720:27, 29 December 2020‎ Brb talk contribs‎ 176,678 bytes +245‎ →‎RNA-Seq analysis interface

curprev 10:0310:03, 16 December 2020‎ Brb talk contribs‎ 176,433 bytes +186‎ →‎Single Cell RNA-Seq
curprev 09:3709:37, 16 December 2020‎ Brb talk contribs‎ 176,247 bytes +173‎ →‎Introduction to Sequence Data Analysis

curprev 15:3415:34, 10 December 2020‎ Brb talk contribs‎ 176,074 bytes +190‎ →‎edX course

curprev 21:4921:49, 8 December 2020‎ Brb talk contribs‎ 175,884 bytes +142‎ →‎Single Cell RNA-Seq Tags: mobile edit mobile web edit
curprev 21:2121:21, 8 December 2020‎ Brb talk contribs‎ 175,742 bytes +147‎ →‎Single Cell RNA-Seq Tags: mobile edit mobile web edit
curprev 10:1110:11, 8 December 2020‎ Brb talk contribs‎ 175,595 bytes +165‎ →‎Single Cell RNA-Seq

curprev 12:0412:04, 7 December 2020‎ Brb talk contribs‎ 175,430 bytes +84‎ →‎Single Cell RNA-Seq

curprev 00:0600:06, 27 November 2020‎ Brb talk contribs‎ 175,346 bytes +208‎ →‎Alignment-free methods

curprev 11:3311:33, 2 November 2020‎ Brb talk contribs‎ 175,138 bytes +213‎ →‎Alignment free

curprev 13:5013:50, 9 October 2020‎ Brb talk contribs‎ 174,925 bytes +149‎ →‎Total RNA-Seq
curprev 10:2910:29, 9 October 2020‎ Brb talk contribs‎ 174,776 bytes +1‎ →‎Seurat
curprev 10:2910:29, 9 October 2020‎ Brb talk contribs‎ 174,775 bytes +27‎ →‎Seurat

curprev 13:4113:41, 10 August 2020‎ Brb talk contribs‎ 174,748 bytes +88‎ →‎Single Cell RNA-Seq

curprev 13:2013:20, 20 June 2020‎ Brb talk contribs‎ 174,660 bytes +115‎ →‎Find multi-mapped reads

curprev 08:2708:27, 18 June 2020‎ Brb talk contribs‎ 174,545 bytes +99‎ →‎Introduction to Sequence Data Analysis

curprev 17:2517:25, 16 June 2020‎ Brb talk contribs‎ 174,446 bytes +232‎ →‎RNA-Seq vs DNA-Seq

curprev 19:3519:35, 15 June 2020‎ Brb talk contribs‎ 174,214 bytes +134‎ →‎Power analysis

curprev 19:2319:23, 4 June 2020‎ Brb talk contribs‎ 174,080 bytes +174‎ →‎PCA

curprev 10:1610:16, 25 May 2020‎ Brb talk contribs‎ 173,906 bytes +220‎ →‎RNA-seq: Basics, Applications and Protocol
curprev 10:1410:14, 25 May 2020‎ Brb talk contribs‎ 173,686 bytes +167‎ →‎RNA-seq: Basics, Applications and Protocol

curprev 21:2321:23, 20 May 2020‎ Brb talk contribs‎ 173,519 bytes +132‎ →‎Single Cell RNA-Seq
curprev 21:2121:21, 20 May 2020‎ Brb talk contribs‎ 173,387 bytes +208‎ →‎How to know that your RNA-seq is stranded or not?

curprev 16:2816:28, 8 May 2020‎ Brb talk contribs‎ 173,179 bytes +1,398‎ →‎ANNOVAR
curprev 16:2616:26, 8 May 2020‎ Brb talk contribs‎ 171,781 bytes +45‎ →‎ANNOVAR

curprev 20:4720:47, 30 April 2020‎ Brb talk contribs‎ 171,761 bytes +75‎ →‎GATK (Java) Tags: mobile edit mobile web edit
curprev 16:0116:01, 30 April 2020‎ Brb talk contribs‎ 171,686 bytes +82‎ →‎ANNOVAR
curprev 15:5515:55, 30 April 2020‎ Brb talk contribs‎ 171,604 bytes +121‎ →‎Pipeline
curprev 15:5215:52, 30 April 2020‎ Brb talk contribs‎ 171,483 bytes +93‎ →‎Introduction to Sequence Data Analysis

curprev 14:4314:43, 29 April 2020‎ Brb talk contribs‎ 171,390 bytes +404‎ →‎bcftools

curprev 16:4816:48, 27 April 2020‎ Brb talk contribs‎ 170,986 bytes +2‎ →‎SnpEff: Genetic variant annotation and effect prediction toolbox
curprev 16:4816:48, 27 April 2020‎ Brb talk contribs‎ 170,984 bytes +4‎ →‎how to deal with errors

curprev 13:1913:19, 24 April 2020‎ Brb talk contribs‎ 170,980 bytes +101‎ →‎Variant Annotation

curprev 11:3811:38, 15 February 2020‎ Brb talk contribs‎ 170,879 bytes +106‎ →‎RNA-seq: Basics, Applications and Protocol

curprev 22:2522:25, 5 February 2020‎ Brb talk contribs‎ 170,773 bytes +33‎ →‎Automation/interactive

curprev 21:4721:47, 20 January 2020‎ Brb talk contribs‎ 170,740 bytes +212‎ →‎Automation

curprev 15:3515:35, 4 January 2020‎ Brb talk contribs‎ 170,528 bytes +89‎ →‎Blogs

curprev 21:2421:24, 26 December 2019‎ Brb talk contribs‎ 170,439 bytes +315‎ →‎scone package: normalization

curprev 22:4522:45, 21 December 2019‎ Brb talk contribs‎ 170,124 bytes +2‎ No edit summary
curprev 22:4322:43, 21 December 2019‎ Brb talk contribs‎ 170,122 bytes +189‎ No edit summary

curprev 21:2321:23, 15 December 2019‎ Brb talk contribs‎ 169,933 bytes +176‎ →‎Automation

curprev 10:0510:05, 13 December 2019‎ Brb talk contribs‎ 169,757 bytes +64‎ →‎Workflow
curprev 09:5309:53, 13 December 2019‎ Brb talk contribs‎ 169,693 bytes +125‎ →‎Workflow

curprev 17:3617:36, 22 November 2019‎ Brb talk contribs‎ 169,568 bytes +233‎ →‎Single Cell RNA-Seq

curprev 12:3012:30, 9 September 2019‎ Brb talk contribs‎ 169,335 bytes +169,335‎ Created page with "File:CentralDogmaMolecular.png = Introduction to Sequence Data Analysis = * [http://www.rna-seqblog.com/review-of-rna-seq-data-analysis-tools/ Review of RNA-Seq Data Ana..."

Retrieved from "https://wiki.taichimd.us/view/NGS"