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  • File:Cvglmnetplot.png
    # 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 # 1 1 2 2 1 2 2 1 1 1 2 1 1 1 2
    (1,000 × 400 (34 KB)) - 17:56, 11 October 2022
  • File:Polygon.png
    plot(c(1, 9), 1:2, type = "n") polygon(1:9, c(2,1,2,1,NA,2,1,2,1),
    (577 × 577 (30 KB)) - 17:31, 23 April 2024
  • File:Ruspini.png
    # ruspini is 75 x 2 op <- par(mfrow= c(3,2), oma= c(0,0, 3, 0),
    (1,000 × 550 (81 KB)) - 10:41, 10 August 2022
  • File:KMcurve.png
    ...leukemia.surv <- survfit(Surv(time, status) ~ x, data = aml[7:17,] ) , lty=2:3) # lty=2 is dashed, 3=dotted.
    (672 × 671 (6 KB)) - 16:15, 30 April 2020
  • File:Dend12.png
    dat <- matrix(rnorm(20), ncol=2) # [1] 8 3 6 5 10 1 9 7 2 4
    (876 × 448 (11 KB)) - 13:17, 13 August 2023
  • File:Twopalette.svg
    par(mfrow=c(1,2), mar = c(5,2,2,1))
    (468 × 468 (43 KB)) - 16:09, 12 April 2019
  • File:Geomerrorbarh.png
    trt = factor(c("Treatment 1", "Treatment 2", "Treatment 3", "Treatment 4", "Treatment 5")), # treatment resp = c(1, 5, 3, 4, 2), # response
    (516 × 400 (17 KB)) - 20:38, 15 October 2023
  • File:RbdBlock.png
    block_shift <- rnorm(5, mean = 0, sd = 2) treatment_shift <- c(A=0, B=4, C=2)
    (500 × 500 (34 KB)) - 21:51, 14 January 2023
  • File:RbdTreat.png
    block_shift <- rnorm(5, mean = 0, sd = 2) treatment_shift <- c(A=0, B=4, C=2)
    (500 × 500 (32 KB)) - 21:50, 14 January 2023
  • File:Paletteheatmap.png
    pal <- matrix(pal, nr=2) # acknowledge a nice warning message # 2 rows, 3 columns with labeling on two axes
    (534 × 615 (12 KB)) - 11:14, 10 May 2023
  • File:ComplexHeatmap1.png
    draw(padding = unit(c(2, 20, 2, 2), "mm"))
    (600 × 450 (29 KB)) - 15:02, 23 August 2022
  • File:DataOutliers.png
    plot(puree[,1], puree[, 2], xlim=c(0,1), ylim=c(0,1), xlab="X", ylab="Y") abline(0,1, lty=2)
    (1,020 × 1,096 (172 KB)) - 15:27, 7 March 2024
  • File:Glmnet4plotn.png
    oldpar <- par(mfrow=c(2,2))
    (800 × 800 (111 KB)) - 12:11, 13 April 2020
  • File:Glmnet4plot.svg
    oldpar <- par(mfrow=c(2,2))
    (563 × 563 (216 KB)) - 12:03, 13 April 2020
  • File:Scatterhist.svg
    zones=matrix(c(2,0,1,3), ncol=2, byrow=TRUE) mtext(ylab, side=2, line=1, outer=TRUE, adj=0,
    (563 × 563 (70 KB)) - 10:22, 16 February 2024
  • File:DataOutliers2.png
    plot(puree[,1], puree[, 2], xlab="X", ylab="Y") col = c("black", "blue", "red", "cyan", "green"), lty=1, lwd=2)
    (1,020 × 1,096 (133 KB)) - 16:49, 8 March 2024
  • File:Methybetahist.png
    hist(x[, 2], xlab="beta", main="Methylation 450k beta")
    (480 × 480 (4 KB)) - 10:19, 30 July 2015
  • File:Rotateheatmap.png
    anno4 = rep(letters[1:3], c(3,3,2))), # rotate the 1st 4 columns, switch the orders of the top 2 rows
    (1,314 × 448 (52 KB)) - 14:44, 13 August 2023
  • File:Jitterbox.png
    col = "black", lwd = 2) points(jitter(rep(i, nr), amount=.2), mat[, i], pch=16)
    (1,020 × 906 (50 KB)) - 22:53, 8 February 2024
  • File:Filtered p.png
    # [2,] 0.9585758 0.9460504 0.9304104 0.9059466 0.8874485 0.8709793 apply(p_bh, 2, function(x) mean(is.na(x))) |> round(2)
    (1,020 × 1,096 (171 KB)) - 21:35, 11 March 2024
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