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curprev 11:4611:46, 2 September 2025 Brb talk contribs 165,549 bytes +1,870 →TMM, RLE, Upper quartile - A hypothetical situation

curprev 07:2607:26, 31 August 2025 Brb talk contribs 163,679 bytes +256 →edgeR normalization

curprev 10:0310:03, 3 July 2025 Brb talk contribs 163,423 bytes +95 →edgeR normalization

curprev 15:0715:07, 10 June 2025 Brb talk contribs 163,328 bytes +177 →DESeq2 for DE analysis

curprev 12:3612:36, 25 February 2025 Brb talk contribs 163,151 bytes +110 →Designs and contrasts

curprev 19:2219:22, 22 December 2024 Brb talk contribs 163,041 bytes +79 →DESeq2, edgeR, limma
curprev 19:1119:11, 22 December 2024 Brb talk contribs 162,962 bytes +179 →DESeq2, edgeR, limma

curprev 15:3115:31, 8 October 2024 Brb talk contribs 162,783 bytes +422 →Negative binomial regression and returned from results()

curprev 14:1214:12, 27 September 2024 Brb talk contribs 162,361 bytes +12 →Normalized counts = raw counts/sizeFactor
curprev 10:0410:04, 27 September 2024 Brb talk contribs 162,349 bytes +440 →Negative binomial regression and returned from results()
curprev 09:5709:57, 27 September 2024 Brb talk contribs 161,909 bytes −79 →DESeq2 normalization
curprev 09:4209:42, 27 September 2024 Brb talk contribs 161,988 bytes +1,207 →Normalized counts = counts/sizeFactor

curprev 11:5311:53, 24 August 2024 Brb talk contribs 160,781 bytes +1,744 →DESeqDataSet methods
curprev 08:2008:20, 24 August 2024 Brb talk contribs 159,037 bytes +120 →DESeqDataSet methods
curprev 08:0708:07, 24 August 2024 Brb talk contribs 158,917 bytes +177 →DESeqDataSet methods

curprev 12:2612:26, 22 August 2024 Brb talk contribs 158,740 bytes +30 →DESeqDataSet methods
curprev 11:4811:48, 22 August 2024 Brb talk contribs 158,710 bytes +1,538 →Pre-filter
curprev 10:2310:23, 22 August 2024 Brb talk contribs 157,172 bytes +213 →Time series

curprev 10:1710:17, 5 August 2024 Brb talk contribs 156,959 bytes +343 →Designs and contrasts

curprev 15:5315:53, 2 August 2024 Brb talk contribs 156,616 bytes +106 →Designs and contrasts

curprev 12:2312:23, 1 August 2024 Brb talk contribs 156,510 bytes +181 →Values returned from results()

curprev 08:2708:27, 31 July 2024 Brb talk contribs 156,329 bytes +768 →Comparison

curprev 13:1513:15, 25 July 2024 Brb talk contribs 155,561 bytes +153 →Designs and contrasts

curprev 17:2917:29, 14 May 2024 Brb talk contribs 155,408 bytes +3,750 →results(contrast)

curprev 13:4813:48, 10 May 2024 Brb talk contribs 151,658 bytes +157 →results(contrast)

curprev 09:5209:52, 24 February 2024 Brb talk contribs 151,501 bytes +89 →results(contrast)

curprev 20:0620:06, 28 January 2024 Brb talk contribs 151,412 bytes +138 →DESeq2, edgeR, limma

curprev 20:1720:17, 22 August 2023 Brb talk contribs 151,274 bytes +140 →Comparison

curprev 08:4408:44, 9 August 2023 Brb talk contribs 151,134 bytes +29 →recount3
curprev 08:4408:44, 9 August 2023 Brb talk contribs 151,105 bytes +129 →recount2
curprev 08:4208:42, 9 August 2023 Brb talk contribs 150,976 bytes +169 →Comparison

curprev 12:0712:07, 27 July 2023 Brb talk contribs 150,807 bytes +350 →betaPrior is FALSE by default

curprev 15:3915:39, 19 July 2023 Brb talk contribs 150,457 bytes +128 →estimateDispersions()
curprev 09:2909:29, 19 July 2023 Brb talk contribs 150,329 bytes +102 →DESeq2 for DE analysis

curprev 11:0011:00, 7 June 2023 Brb talk contribs 150,227 bytes +321 →Massive Mining of Publicly Available RNA-seq Data from Human and Mouse

curprev 14:0414:04, 21 May 2023 Brb talk contribs 149,906 bytes +95 →collapseReplicates

curprev 13:3113:31, 9 May 2023 Brb talk contribs 149,811 bytes +327 →DESeq() and gene filtering

curprev 20:5920:59, 29 April 2023 Brb talk contribs 149,484 bytes +85 →Values returned from results()

curprev 09:4309:43, 28 April 2023 Brb talk contribs 149,399 bytes +448 →Normalized counts = counts/sizeFactor

curprev 11:4611:46, 16 April 2023 Brb talk contribs 148,951 bytes +228 →Values returned from results()
curprev 11:4311:43, 16 April 2023 Brb talk contribs 148,723 bytes +411 →DESeq2 paired multifactor test

curprev 18:5718:57, 11 April 2023 Brb talk contribs 148,312 bytes +319 →Normalized counts = counts/sizeFactor

curprev 15:2115:21, 30 March 2023 Brb talk contribs 147,993 bytes +154 →DESeq() and gene filtering

curprev 12:5512:55, 11 April 2022 Brb talk contribs 147,839 bytes +133 →rtracklayer package
curprev 12:5312:53, 11 April 2022 Brb talk contribs 147,706 bytes +18 →R

curprev 16:1916:19, 16 February 2022 Brb talk contribs 147,688 bytes +575 →Comparison

curprev 11:5711:57, 29 December 2021 Brb talk contribs 147,113 bytes −106 →sam/bam, "samtools view" and Rsamtools Tags: mobile edit mobile web edit advanced mobile edit
curprev 09:1809:18, 29 December 2021 Brb talk contribs 147,219 bytes +429 →results(contrast)

curprev 20:5420:54, 28 December 2021 Brb talk contribs 146,790 bytes +137 →Values returned from results()
curprev 20:4720:47, 28 December 2021 Brb talk contribs 146,653 bytes +120 →Values returned from results()

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