Anders2013: Revision history

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curprev 13:4913:49, 11 August 2016‎ Brb talk contribs‎ 101,420 bytes +12‎ →‎sam/bam, "samtools view" and Rsamtools
curprev 10:1310:13, 11 August 2016‎ Brb talk contribs‎ 101,408 bytes +89‎ →‎sam/bam, "samtools view" and Rsamtools

curprev 12:2512:25, 8 August 2016‎ Brb talk contribs‎ 100,445 bytes +69‎ →‎sam/bam, "samtools view" and Rsamtools
curprev 12:0912:09, 8 August 2016‎ Brb talk contribs‎ 100,376 bytes +274‎ →‎sam/bam, "samtools view" and Rsamtools
curprev 10:5910:59, 8 August 2016‎ Brb talk contribs‎ 100,102 bytes +31‎ →‎sam/bam, "samtools view" and Rsamtools
curprev 10:5710:57, 8 August 2016‎ Brb talk contribs‎ 100,071 bytes +461‎ →‎sam/bam, "samtools view" and Rsamtools

curprev 07:0907:09, 6 August 2016‎ Brb talk contribs‎ 99,610 bytes +1,531‎ →‎chromosomes

curprev 15:2615:26, 27 July 2016‎ Brb talk contribs‎ 90,450 bytes +267‎ →‎Splice junctions
curprev 12:3512:35, 27 July 2016‎ Brb talk contribs‎ 90,183 bytes +55‎ →‎Small test data from Tophat (paired end)
curprev 12:2112:21, 27 July 2016‎ Brb talk contribs‎ 90,128 bytes −116‎ →‎GSE51403 (full R script)
curprev 12:1712:17, 27 July 2016‎ Brb talk contribs‎ 90,244 bytes +184‎ →‎GEO

curprev 21:0021:00, 25 July 2016‎ Brb talk contribs‎ 90,060 bytes 0‎ →‎[http://www.genefriends.org/ReadCounter ReadCounter= - htseq alternative
curprev 15:3015:30, 25 July 2016‎ Brb talk contribs‎ 90,060 bytes +3,357‎ →‎DESeq for DE analysis

curprev 20:2020:20, 22 July 2016‎ Brb talk contribs‎ 86,703 bytes +156‎ →‎Count reads using htseq-count (sam -> count)
curprev 20:1020:10, 22 July 2016‎ Brb talk contribs‎ 86,547 bytes +227‎ →‎Count reads using htseq-count (sam -> count)

curprev 08:2308:23, 20 July 2016‎ Brb talk contribs‎ 86,320 bytes +569‎ →‎Some lessons

curprev 15:2815:28, 9 March 2016‎ Brb talk contribs‎ 85,393 bytes +346‎ →‎Inspect alignments with IGV

curprev 12:4612:46, 1 March 2016‎ Brb talk contribs‎ 85,047 bytes +39‎ →‎sam/bam, "samtools view" and Rsamtools

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