Glmnet: Revision history

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curprev 11:3311:33, 15 August 2023‎ Brb talk contribs‎ 73,359 bytes +23‎ →‎Basic

curprev 08:1808:18, 29 July 2023‎ Brb talk contribs‎ 73,336 bytes +553‎ →‎snpnet

curprev 13:4213:42, 27 July 2023‎ Brb talk contribs‎ 72,783 bytes −9,021‎ →‎caret

curprev 19:5319:53, 11 June 2023‎ Brb talk contribs‎ 81,804 bytes +153‎ →‎Adaptive lasso and weights

curprev 10:4910:49, 24 May 2023‎ Brb talk contribs‎ 81,651 bytes +180‎ →‎Collinearity
curprev 10:4810:48, 24 May 2023‎ Brb talk contribs‎ 81,471 bytes +128‎ →‎categorical covariates, multi-collinearity/multicollinearity, contrasts()
curprev 10:2310:23, 24 May 2023‎ Brb talk contribs‎ 81,343 bytes +86‎ →‎Prediction

curprev 14:1614:16, 21 May 2023‎ Brb talk contribs‎ 81,257 bytes +30‎ →‎Prediction
curprev 14:1314:13, 21 May 2023‎ Brb talk contribs‎ 81,227 bytes +766‎ →‎Prediction
curprev 14:0514:05, 21 May 2023‎ Brb talk contribs‎ 80,461 bytes +203‎ →‎Prediction

curprev 08:2608:26, 12 April 2023‎ Brb talk contribs‎ 80,258 bytes +81‎ →‎Gradient descent

curprev 20:0920:09, 22 February 2023‎ Brb talk contribs‎ 80,177 bytes +152‎ →‎Feature selection

curprev 22:2322:23, 30 December 2022‎ Brb talk contribs‎ 80,025 bytes +492‎ →‎Gradient descent

curprev 08:3808:38, 12 October 2022‎ Brb talk contribs‎ 79,533 bytes 0‎ →‎Number of nonzero in cv.glment plot is not monotonic in lambda
curprev 08:3708:37, 12 October 2022‎ Brb talk contribs‎ 79,533 bytes 0‎ →‎Number of nonzero in cv.glment plot is not monotonic in lambda

curprev 18:0118:01, 11 October 2022‎ Brb talk contribs‎ 79,533 bytes +72‎ →‎Number of nonzero in cv.glment plot is not monotonic in lambda
curprev 17:5917:59, 11 October 2022‎ Brb talk contribs‎ 79,461 bytes +163‎ →‎Number of nonzero in cv.glment plot is not monotonic in lambda
curprev 16:4116:41, 11 October 2022‎ Brb talk contribs‎ 79,298 bytes +102‎ →‎cv.glmnet and glmnet give different coefficients
curprev 16:2216:22, 11 October 2022‎ Brb talk contribs‎ 79,196 bytes +169‎ →‎Relaxed fit and \gamma parameter

curprev 15:2215:22, 7 October 2022‎ Brb talk contribs‎ 79,027 bytes +364‎ →‎Multi-response

curprev 14:2314:23, 30 September 2022‎ Brb talk contribs‎ 78,663 bytes +188‎ →‎Simulation study
curprev 13:5913:59, 30 September 2022‎ Brb talk contribs‎ 78,475 bytes +5‎ →‎Simulation study
curprev 13:5813:58, 30 September 2022‎ Brb talk contribs‎ 78,470 bytes +148‎ →‎Simulation study

curprev 13:4313:43, 25 September 2022‎ Brb talk contribs‎ 78,322 bytes +273‎ →‎Multiple seeds in cross-validation

curprev 15:1315:13, 23 September 2022‎ Brb talk contribs‎ 78,049 bytes +119‎ →‎Lambda \lambda

curprev 09:5009:50, 20 September 2022‎ Brb talk contribs‎ 77,930 bytes +72‎ →‎Cyclical coordinate descent algorithm
curprev 09:4709:47, 20 September 2022‎ Brb talk contribs‎ 77,858 bytes +320‎ →‎Cyclic coordinate descent

curprev 17:4317:43, 18 September 2022‎ Brb talk contribs‎ 77,538 bytes +179‎ →‎cv.glmnet and deviance
curprev 17:3017:30, 18 September 2022‎ Brb talk contribs‎ 77,359 bytes +80‎ →‎cv.glmnet and deviance

curprev 09:5209:52, 13 September 2022‎ Brb talk contribs‎ 77,279 bytes +161‎ →‎Variable importance

curprev 14:3814:38, 1 September 2022‎ Brb talk contribs‎ 77,118 bytes +444‎ →‎Filtering variables

curprev 13:5513:55, 31 August 2022‎ Brb talk contribs‎ 76,674 bytes +151‎ →‎Cross Validated LASSO: What are its weaknesses?

curprev 15:4815:48, 29 August 2022‎ Brb talk contribs‎ 76,523 bytes +240‎ →‎Proportional matrix: family="binomial"

curprev 16:3216:32, 17 August 2022‎ Brb talk contribs‎ 76,283 bytes +179‎ →‎Group lasso
curprev 16:2416:24, 17 August 2022‎ Brb talk contribs‎ 76,104 bytes +154‎ →‎Other methods

curprev 14:5114:51, 12 July 2022‎ Brb talk contribs‎ 75,950 bytes +614‎ →‎R-square/R2 and dev.ratio

curprev 15:5015:50, 1 July 2022‎ Brb talk contribs‎ 72,964 bytes +197‎ →‎%Dev and R2

curprev 09:1709:17, 1 June 2022‎ Brb talk contribs‎ 72,767 bytes +181‎ →‎Feature selection

curprev 14:5314:53, 14 May 2022‎ Brb talk contribs‎ 72,586 bytes +214‎ →‎Extract/compute deviance
curprev 14:5014:50, 14 May 2022‎ Brb talk contribs‎ 72,372 bytes +226‎ →‎Multiple seeds in cross-validation
curprev 14:4514:45, 14 May 2022‎ Brb talk contribs‎ 72,146 bytes +171‎ →‎AUC
curprev 14:4414:44, 14 May 2022‎ Brb talk contribs‎ 71,975 bytes +115‎ →‎Other

curprev 17:0217:02, 7 May 2022‎ Brb talk contribs‎ 71,860 bytes +164‎ →‎Other methods

curprev 08:5508:55, 6 April 2022‎ Brb talk contribs‎ 71,696 bytes +1‎ →‎ridge regression and multicollinear
curprev 08:5408:54, 6 April 2022‎ Brb talk contribs‎ 71,695 bytes +44‎ →‎ridge regression and multicollinear

curprev 11:1911:19, 23 March 2022‎ Brb talk contribs‎ 71,651 bytes +732‎ →‎ridge regression

curprev 16:2816:28, 24 February 2022‎ Brb talk contribs‎ 70,919 bytes +125‎ →‎Group lasso

curprev 17:5417:54, 23 February 2022‎ Brb talk contribs‎ 70,794 bytes −193‎ →‎Group lasso
curprev 10:5410:54, 23 February 2022‎ Brb talk contribs‎ 70,987 bytes +284‎ →‎Variable importance

curprev 17:0417:04, 22 February 2022‎ Brb talk contribs‎ 70,703 bytes +49‎ →‎categorical covariates, multi-collinearity/multicollinearity, contrasts()
curprev 16:0616:06, 22 February 2022‎ Brb talk contribs‎ 70,654 bytes +2,914‎ →‎categorical covariates, multi-collinearity/multicollinearity, contrasts()
curprev 14:3814:38, 22 February 2022‎ Brb talk contribs‎ 67,740 bytes +322‎ →‎categorical covariates, multi-collinearity/multicollinearity, contrasts()
curprev 11:3611:36, 22 February 2022‎ Brb talk contribs‎ 67,418 bytes +572‎ →‎Group lasso

curprev 08:2608:26, 21 February 2022‎ Brb talk contribs‎ 66,846 bytes +160‎ →‎categorical covariates, multi-collinearity/multicollinearity, contrasts()

curprev 22:3722:37, 2 February 2022‎ Brb talk contribs‎ 66,096 bytes +198‎ →‎LASSO vs Least angle regression
curprev 15:4615:46, 2 February 2022‎ Brb talk contribs‎ 65,898 bytes +733‎ →‎LASSO vs Least angle regression

curprev 13:1313:13, 27 January 2022‎ Brb talk contribs‎ 65,165 bytes +510‎ →‎print() method

curprev 15:4215:42, 15 January 2022‎ Brb talk contribs‎ 64,655 bytes +185‎ →‎penalty.factor

curprev 10:3310:33, 19 December 2021‎ Brb talk contribs‎ 64,470 bytes −5,640‎ →‎Tidymodels and tune
curprev 10:3110:31, 19 December 2021‎ Brb talk contribs‎ 70,110 bytes 0‎ →‎Tidymodels and tune

curprev 21:4921:49, 16 December 2021‎ Brb talk contribs‎ 70,110 bytes +241‎ →‎Tidymodels and tune Tags: mobile edit mobile web edit

curprev 17:1817:18, 11 December 2021‎ Brb talk contribs‎ 69,869 bytes +201‎ →‎Survival data
curprev 09:1609:16, 11 December 2021‎ Brb talk contribs‎ 69,668 bytes +160‎ →‎Release

curprev 10:1710:17, 26 November 2021‎ Brb talk contribs‎ 69,508 bytes +189‎ →‎Group lasso

curprev 09:5609:56, 8 November 2021‎ Brb talk contribs‎ 68,887 bytes +108‎ →‎R packages related to glmnet

curprev 22:1622:16, 7 November 2021‎ Brb talk contribs‎ 68,779 bytes +88‎ →‎Tidymodels and tune
curprev 10:5410:54, 7 November 2021‎ Brb talk contribs‎ 68,691 bytes +761‎ →‎cv.glmnet and deviance
curprev 10:1410:14, 7 November 2021‎ Brb talk contribs‎ 67,930 bytes +283‎ →‎predict() and coef() methods
curprev 10:0110:01, 7 November 2021‎ Brb talk contribs‎ 67,647 bytes +196‎ →‎cv.glmnet and deviance

curprev 11:0611:06, 4 November 2021‎ Brb talk contribs‎ 67,451 bytes +95‎ →‎Lambda \lambda

curprev 11:2211:22, 3 November 2021‎ Brb talk contribs‎ 67,356 bytes +63‎ →‎Exact definition of Deviance measure in glmnet package, with CV
curprev 11:2011:20, 3 November 2021‎ Brb talk contribs‎ 67,293 bytes +276‎ →‎No need for glmnet if we have run cv.glmnet

curprev 10:2810:28, 2 November 2021‎ Brb talk contribs‎ 67,017 bytes +9‎ →‎Lambda \lambda
curprev 10:2710:27, 2 November 2021‎ Brb talk contribs‎ 67,008 bytes +176‎ →‎Lambda \lambda

curprev 14:1814:18, 31 October 2021‎ Brb talk contribs‎ 66,832 bytes +151‎ →‎Lambda \lambda
curprev 10:3910:39, 31 October 2021‎ Brb talk contribs‎ 66,681 bytes +13‎ →‎Compare models
curprev 10:3810:38, 31 October 2021‎ Brb talk contribs‎ 66,668 bytes +396‎ →‎seeds

curprev 07:1607:16, 30 October 2021‎ Brb talk contribs‎ 66,272 bytes +127‎ →‎Group lasso

curprev 09:4509:45, 25 October 2021‎ Brb talk contribs‎ 66,145 bytes +136‎ →‎Tidymodels and tune
curprev 09:3909:39, 25 October 2021‎ Brb talk contribs‎ 66,009 bytes +2,262‎ →‎Tidymodels and tune

curprev 16:1816:18, 24 October 2021‎ Brb talk contribs‎ 63,747 bytes +60‎ →‎Tidymodels and tune

curprev 14:2314:23, 18 October 2021‎ Brb talk contribs‎ 63,687 bytes 0‎ →‎Group lasso
curprev 13:5413:54, 18 October 2021‎ Brb talk contribs‎ 63,687 bytes −1‎ →‎Group lasso
curprev 13:5413:54, 18 October 2021‎ Brb talk contribs‎ 63,688 bytes +214‎ →‎Group lasso

curprev 08:2408:24, 9 October 2021‎ Brb talk contribs‎ 63,474 bytes +110‎ →‎Tidymodels and tune

curprev 10:3610:36, 4 October 2021‎ Brb talk contribs‎ 63,364 bytes +406‎ →‎Tidymodels and tune
curprev 09:4109:41, 4 October 2021‎ Brb talk contribs‎ 62,958 bytes +194‎ →‎Tidymodels and tune
curprev 09:3209:32, 4 October 2021‎ Brb talk contribs‎ 62,764 bytes +1‎ →‎Tidymodel and tune
curprev 09:3209:32, 4 October 2021‎ Brb talk contribs‎ 62,763 bytes +324‎ →‎Tidymodel and tune

curprev 16:4016:40, 19 September 2021‎ Brb talk contribs‎ 62,439 bytes +90‎ →‎Tidymodel and tune

curprev 10:2610:26, 6 September 2021‎ Brb talk contribs‎ 62,349 bytes +79‎ →‎Gradient descent

curprev 08:5408:54, 14 August 2021‎ Brb talk contribs‎ 62,270 bytes +153‎ →‎Tidymodel and tune

curprev 17:0017:00, 19 July 2021‎ Brb talk contribs‎ 61,510 bytes +335‎ →‎Random data

curprev 21:2921:29, 8 July 2021‎ Brb talk contribs‎ 61,175 bytes +177‎ →‎LASSO vs Least angle regression

curprev 16:2616:26, 18 June 2021‎ Brb talk contribs‎ 60,998 bytes +141‎ →‎Tidymodel and tune

curprev 16:4216:42, 12 April 2021‎ Brb talk contribs‎ 60,857 bytes +108‎ →‎R-square/R2
curprev 10:4710:47, 12 April 2021‎ Brb talk contribs‎ 60,749 bytes +368‎ →‎Variable importance
curprev 10:3110:31, 12 April 2021‎ Brb talk contribs‎ 60,381 bytes +530‎ →‎predict() and coef() methods
curprev 09:2609:26, 12 April 2021‎ Brb talk contribs‎ 59,851 bytes +155‎ →‎Lambda \lambda

curprev 12:4212:42, 23 March 2021‎ Brb talk contribs‎ 59,696 bytes +111‎ →‎R packages related to glmnet

curprev 18:1318:13, 5 March 2021‎ Brb talk contribs‎ 59,585 bytes +205‎ →‎Group lasso

curprev 21:1021:10, 24 January 2021‎ Brb talk contribs‎ 59,380 bytes +236‎ →‎Prediction

curprev 22:3422:34, 18 January 2021‎ Brb talk contribs‎ 59,144 bytes +121‎ →‎Tidymodel and tune

curprev 16:0816:08, 17 January 2021‎ Brb talk contribs‎ 59,023 bytes +374‎ →‎Discussion

curprev 22:2122:21, 7 January 2021‎ Brb talk contribs‎ 58,649 bytes +72‎ →‎Tidymodel and tune
curprev 22:1322:13, 7 January 2021‎ Brb talk contribs‎ 58,577 bytes +105‎ →‎Tidymodel and tune

curprev 12:2712:27, 26 December 2020‎ Brb talk contribs‎ 58,472 bytes +807‎ →‎Lambda \lambda

curprev 22:1022:10, 24 December 2020‎ Brb talk contribs‎ 57,665 bytes +23‎ →‎Tidymodel and tune
curprev 22:0722:07, 24 December 2020‎ Brb talk contribs‎ 57,642 bytes +106‎ →‎Tidymodel and tune
curprev 18:1018:10, 24 December 2020‎ Brb talk contribs‎ 57,536 bytes +82‎ →‎Tidymodel and tune

curprev 17:1517:15, 23 December 2020‎ Brb talk contribs‎ 57,454 bytes +19‎ No edit summary
curprev 16:4216:42, 23 December 2020‎ Brb talk contribs‎ 57,435 bytes +110‎ →‎tidymodels and tune

curprev 12:2612:26, 19 December 2020‎ Brb talk contribs‎ 57,325 bytes −103‎ No edit summary
curprev 12:2512:25, 19 December 2020‎ Brb talk contribs‎ 57,428 bytes +218‎ →‎Binary particle swarm optimization (BPSO)

curprev 18:5218:52, 14 December 2020‎ Brb talk contribs‎ 57,210 bytes +321‎ →‎tidymodels
curprev 18:4918:49, 14 December 2020‎ Brb talk contribs‎ 56,889 bytes +426‎ →‎caret

curprev 23:0423:04, 13 December 2020‎ Brb talk contribs‎ 56,463 bytes +309‎ →‎caret
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curprev 20:5520:55, 30 November 2020‎ Brb talk contribs‎ 56,019 bytes +99‎ →‎caret
curprev 20:5020:50, 30 November 2020‎ Brb talk contribs‎ 55,920 bytes +22‎ →‎caret
curprev 20:3720:37, 30 November 2020‎ Brb talk contribs‎ 55,898 bytes +54‎ →‎caret
curprev 20:3120:31, 30 November 2020‎ Brb talk contribs‎ 55,844 bytes +114‎ →‎caret

curprev 21:0521:05, 17 September 2020‎ Brb talk contribs‎ 55,730 bytes +278‎ →‎Group lasso

curprev 14:4414:44, 26 August 2020‎ Brb talk contribs‎ 54,074 bytes +819‎ →‎caret
curprev 14:0214:02, 26 August 2020‎ Brb talk contribs‎ 53,255 bytes +1,106‎ →‎caret
curprev 11:0211:02, 26 August 2020‎ Brb talk contribs‎ 52,149 bytes 0‎ →‎caret
curprev 10:5810:58, 26 August 2020‎ Brb talk contribs‎ 52,149 bytes +529‎ →‎caret

curprev 13:0313:03, 12 August 2020‎ Brb talk contribs‎ 45,819 bytes +162‎ →‎caret

curprev 10:3110:31, 11 August 2020‎ Brb talk contribs‎ 45,657 bytes +241‎ →‎caret

curprev 16:4216:42, 18 July 2020‎ Brb talk contribs‎ 43,032 bytes +372‎ →‎Quadratic programming

curprev 12:0612:06, 15 July 2020‎ Brb talk contribs‎ 42,660 bytes +204‎ →‎Quadratic programming
curprev 11:5811:58, 15 July 2020‎ Brb talk contribs‎ 42,456 bytes +218‎ →‎Discussion

curprev 17:2517:25, 23 June 2020‎ Brb talk contribs‎ 42,238 bytes +261‎ →‎Extract/compute deviance

curprev 15:3915:39, 17 June 2020‎ Brb talk contribs‎ 34,779 bytes −724‎ →‎cv.glmnet
curprev 15:3815:38, 17 June 2020‎ Brb talk contribs‎ 35,503 bytes +724‎ →‎cv.glmnet in cox model

curprev 12:3012:30, 16 June 2020‎ Brb talk contribs‎ 34,779 bytes +289‎ →‎Group lasso

curprev 16:5016:50, 9 June 2020‎ Brb talk contribs‎ 34,490 bytes +337‎ →‎Minimax concave penalty (MCP)
curprev 15:3215:32, 9 June 2020‎ Brb talk contribs‎ 34,153 bytes +384‎ →‎Group lasso
curprev 13:3013:30, 9 June 2020‎ Brb talk contribs‎ 33,769 bytes +673‎ →‎Adaptive lasso and weights
curprev 11:2511:25, 9 June 2020‎ Brb talk contribs‎ 33,096 bytes +197‎ →‎Survival data

curprev 09:3209:32, 19 May 2020‎ Brb talk contribs‎ 32,049 bytes +89‎ →‎Lambda \lambda
curprev 09:1809:18, 19 May 2020‎ Brb talk contribs‎ 31,960 bytes +197‎ →‎Group lasso

curprev 15:3015:30, 17 May 2020‎ Brb talk contribs‎ 31,763 bytes +1‎ →‎Group lasso
curprev 15:2615:26, 17 May 2020‎ Brb talk contribs‎ 31,762 bytes +130‎ →‎Group lasso
curprev 15:2515:25, 17 May 2020‎ Brb talk contribs‎ 31,632 bytes +145‎ →‎Group lasso
curprev 15:1815:18, 17 May 2020‎ Brb talk contribs‎ 31,487 bytes +178‎ →‎Survival data

curprev 15:0015:00, 15 May 2020‎ Brb talk contribs‎ 31,309 bytes +1,211‎ →‎Group lasso
curprev 13:5213:52, 15 May 2020‎ Brb talk contribs‎ 30,098 bytes +46‎ →‎Group lasso
curprev 11:3011:30, 15 May 2020‎ Brb talk contribs‎ 30,052 bytes +201‎ →‎Group lasso

curprev 15:1815:18, 14 May 2020‎ Brb talk contribs‎ 29,851 bytes +151‎ →‎Group lasso

curprev 07:5407:54, 8 May 2020‎ Brb talk contribs‎ 25,354 bytes +128‎ →‎Timing
curprev 07:5207:52, 8 May 2020‎ Brb talk contribs‎ 25,226 bytes +310‎ →‎cv.glmnet in cox model
curprev 07:4707:47, 8 May 2020‎ Brb talk contribs‎ 24,916 bytes +252‎ →‎Lambda \lambda

curprev 22:5122:51, 24 April 2020‎ Brb talk contribs‎ 20,166 bytes +279‎ →‎Survival data
curprev 22:4222:42, 24 April 2020‎ Brb talk contribs‎ 19,887 bytes +89‎ →‎Survival data
curprev 22:4022:40, 24 April 2020‎ Brb talk contribs‎ 19,798 bytes +530‎ →‎Survival data

curprev 16:1116:11, 14 April 2020‎ Brb talk contribs‎ 17,218 bytes +292‎ →‎Relaxed fit and \gamma parameter

curprev 15:3915:39, 9 April 2020‎ Brb talk contribs‎ 14,609 bytes +38‎ →‎Lambda
curprev 15:3315:33, 9 April 2020‎ Brb talk contribs‎ 14,571 bytes +4‎ →‎Lambda

curprev 21:3821:38, 29 March 2020‎ Brb talk contribs‎ 14,567 bytes +110‎ →‎Survival data
curprev 21:3121:31, 29 March 2020‎ Brb talk contribs‎ 14,457 bytes +336‎ →‎Cyclic coordinate descent
curprev 19:0219:02, 29 March 2020‎ Brb talk contribs‎ 14,121 bytes +141‎ →‎Lambda

curprev 16:4516:45, 26 March 2020‎ Brb talk contribs‎ 13,980 bytes +808‎ →‎Adaptive lasso

curprev 19:5019:50, 24 March 2020‎ Brb talk contribs‎ 13,172 bytes +125‎ →‎Basic

curprev 19:2419:24, 18 March 2020‎ Brb talk contribs‎ 13,047 bytes +207‎ →‎Tidymodel
curprev 19:2119:21, 18 March 2020‎ Brb talk contribs‎ 12,840 bytes +134‎ →‎LASSO vs Least angle regression

curprev 21:4121:41, 16 March 2020‎ Brb talk contribs‎ 12,706 bytes +169‎ →‎Basic
curprev 21:2421:24, 16 March 2020‎ Brb talk contribs‎ 12,537 bytes +234‎ →‎Prediction

curprev 16:4916:49, 29 February 2020‎ Brb talk contribs‎ 12,303 bytes +208‎ No edit summary

curprev 21:4621:46, 19 February 2020‎ Brb talk contribs‎ 12,095 bytes +78‎ No edit summary

curprev 21:5921:59, 5 February 2020‎ Brb talk contribs‎ 12,017 bytes +12,017‎ Created page with "* https://en.wikipedia.org/wiki/Lasso_(statistics). It has a discussion when two covariates are highly correlated. For example if gene <math>i</math> and gene <math>j</math> a..."

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