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curprev 11:5211:52, 18 January 2024‎ Brb talk contribs‎ 94,137 bytes +634‎ →‎Adjust the height of column annotation
curprev 10:4410:44, 18 January 2024‎ Brb talk contribs‎ 93,503 bytes +368‎ →‎ComplexHeatmap

curprev 19:3619:36, 14 January 2024‎ Brb talk contribs‎ 93,135 bytes +112‎ →‎R
curprev 15:4215:42, 14 January 2024‎ Brb talk contribs‎ 93,023 bytes +33‎ →‎Get the ordering

curprev 11:0011:00, 21 November 2023‎ Brb talk contribs‎ 92,990 bytes +191‎ →‎dynamicTreeCut package

curprev 20:4020:40, 18 November 2023‎ Brb talk contribs‎ 92,799 bytes +651‎ →‎ComplexHeatmap

curprev 10:1710:17, 1 November 2023‎ Brb talk contribs‎ 92,148 bytes +299‎ →‎ComplexHeatmap

curprev 10:5510:55, 14 September 2023‎ Brb talk contribs‎ 91,849 bytes +22‎ →‎More examples
curprev 10:5310:53, 14 September 2023‎ Brb talk contribs‎ 91,827 bytes +41‎ →‎More examples

curprev 17:0817:08, 21 August 2023‎ Brb talk contribs‎ 91,786 bytes 0‎ →‎Mahalanobis distance

curprev 15:2215:22, 13 August 2023‎ Brb talk contribs‎ 91,786 bytes +299‎ →‎dendextend package
curprev 15:1715:17, 13 August 2023‎ Brb talk contribs‎ 91,487 bytes +44‎ →‎Reorder/rotate branches in dendrograms
curprev 15:1115:11, 13 August 2023‎ Brb talk contribs‎ 91,443 bytes +839‎ →‎Reorder/rotate branches in dendrograms
curprev 14:4714:47, 13 August 2023‎ Brb talk contribs‎ 90,604 bytes +298‎ →‎Reorder dendrograms

curprev 07:4307:43, 29 July 2023‎ Brb talk contribs‎ 88,617 bytes +118‎ →‎ggplot2::geom_tile()

curprev 14:3014:30, 19 July 2023‎ Brb talk contribs‎ 88,499 bytes +161‎ →‎Benchmark clustering algorithms

curprev 08:5608:56, 7 June 2023‎ Brb talk contribs‎ 88,338 bytes +285‎ →‎R

curprev 22:1422:14, 3 June 2023‎ Brb talk contribs‎ 88,053 bytes +289‎ →‎ComplexHeatmap
curprev 22:1122:11, 3 June 2023‎ Brb talk contribs‎ 87,764 bytes +47‎ →‎ComplexHeatmap

curprev 17:2617:26, 19 May 2023‎ Brb talk contribs‎ 87,717 bytes +395‎ →‎Get the rows/columns order
curprev 17:1217:12, 19 May 2023‎ Brb talk contribs‎ 87,322 bytes +321‎ →‎Hierarchical clustering
curprev 16:5616:56, 19 May 2023‎ Brb talk contribs‎ 87,001 bytes +236‎ →‎ComplexHeatmap

curprev 20:1020:10, 16 May 2023‎ Brb talk contribs‎ 86,765 bytes +240‎ →‎Heatmap annotation
curprev 17:2117:21, 16 May 2023‎ Brb talk contribs‎ 86,525 bytes +136‎ →‎Heatmap annotation
curprev 17:0817:08, 16 May 2023‎ Brb talk contribs‎ 86,389 bytes +1,942‎ →‎Heatmap annotation
curprev 16:1616:16, 16 May 2023‎ Brb talk contribs‎ 84,447 bytes +10‎ →‎cutoffs in colorRamp2()

curprev 19:4519:45, 7 May 2023‎ Brb talk contribs‎ 84,437 bytes +170‎ →‎Papers

curprev 12:5812:58, 4 May 2023‎ Brb talk contribs‎ 84,267 bytes +185‎ →‎Colors and legend

curprev 22:1322:13, 10 April 2023‎ Brb talk contribs‎ 84,082 bytes +127‎ →‎SubtypeDrug: Prioritization of Candidate Cancer Subtype Specific Drugs

curprev 20:0720:07, 27 February 2023‎ Brb talk contribs‎ 83,297 bytes +55‎ →‎RowSideColors and ColSideColors options
curprev 19:5919:59, 27 February 2023‎ Brb talk contribs‎ 83,242 bytes +110‎ →‎gplots package and heatmap.2()
curprev 19:5019:50, 27 February 2023‎ Brb talk contribs‎ 83,132 bytes +154‎ →‎Legend/annotation
curprev 17:5217:52, 27 February 2023‎ Brb talk contribs‎ 82,978 bytes +7‎ →‎gplots package and heatmap.2()

curprev 09:5409:54, 30 January 2023‎ Brb talk contribs‎ 82,971 bytes +170‎ →‎Save images to files

curprev 21:2921:29, 9 January 2023‎ Brb talk contribs‎ 82,801 bytes +58‎ →‎Reorder dendrograms

curprev 21:3821:38, 7 January 2023‎ Brb talk contribs‎ 77,918 bytes +387‎ →‎Heatmap split
curprev 15:5115:51, 7 January 2023‎ Brb talk contribs‎ 77,531 bytes +168‎ →‎Heatmap split
curprev 15:1715:17, 7 January 2023‎ Brb talk contribs‎ 77,363 bytes +208‎ →‎Row standardization/normalization

curprev 22:5222:52, 3 January 2023‎ Brb talk contribs‎ 77,155 bytes +141‎ →‎heatmap3

curprev 09:3409:34, 15 December 2022‎ Brb talk contribs‎ 77,014 bytes +246‎ →‎Colors

curprev 15:4415:44, 13 December 2022‎ Brb talk contribs‎ 76,768 bytes +52‎ →‎More examples
curprev 15:2315:23, 13 December 2022‎ Brb talk contribs‎ 76,716 bytes +212‎ →‎Output from heatmap.2 examples
curprev 15:1015:10, 13 December 2022‎ Brb talk contribs‎ 76,504 bytes +605‎ →‎More examples

curprev 14:2414:24, 12 December 2022‎ Brb talk contribs‎ 75,899 bytes +156‎ →‎scale parameter

curprev 17:4217:42, 6 December 2022‎ Brb talk contribs‎ 69,450 bytes +392‎ →‎Missing data

curprev 22:2322:23, 29 November 2022‎ Brb talk contribs‎ 69,058 bytes +150‎ →‎RdYlBu

curprev 13:4513:45, 27 November 2022‎ Brb talk contribs‎ 65,398 bytes +288‎ →‎Comparing different linkage methods

curprev 20:3520:35, 24 November 2022‎ Brb talk contribs‎ 65,110 bytes +32‎ →‎Silhouette score/width
curprev 20:3020:30, 24 November 2022‎ Brb talk contribs‎ 65,078 bytes +178‎ →‎mbkmeans
curprev 20:2620:26, 24 November 2022‎ Brb talk contribs‎ 64,900 bytes +345‎ →‎R
curprev 20:2220:22, 24 November 2022‎ Brb talk contribs‎ 64,555 bytes +91‎ →‎R

curprev 20:3920:39, 26 October 2022‎ Brb talk contribs‎ 62,252 bytes +86‎ →‎pheatmap

curprev 10:3210:32, 30 August 2022‎ Brb talk contribs‎ 62,166 bytes +735‎ →‎scales package

curprev 15:0315:03, 23 August 2022‎ Brb talk contribs‎ 61,431 bytes +68‎ →‎Reorder dendrograms
curprev 08:2808:28, 23 August 2022‎ Brb talk contribs‎ 61,363 bytes +606‎ →‎Double dipping

curprev 16:1916:19, 22 August 2022‎ Brb talk contribs‎ 60,757 bytes +394‎ →‎Double dipping
curprev 16:0816:08, 22 August 2022‎ Brb talk contribs‎ 60,363 bytes +87‎ →‎Double dipping
curprev 15:3715:37, 22 August 2022‎ Brb talk contribs‎ 60,276 bytes +422‎ →‎Double dipping
curprev 14:1914:19, 22 August 2022‎ Brb talk contribs‎ 59,854 bytes +30‎ →‎Double dipping

curprev 08:3508:35, 19 August 2022‎ Brb talk contribs‎ 59,824 bytes +100‎ →‎Double dipping

curprev 13:5213:52, 12 August 2022‎ Brb talk contribs‎ 59,724 bytes +184‎ →‎Density based clustering

curprev 21:0921:09, 3 August 2022‎ Brb talk contribs‎ 58,104 bytes +76‎ →‎ComplexHeatmap

curprev 16:5816:58, 14 July 2022‎ Brb talk contribs‎ 58,028 bytes +159‎ →‎Mahalanobis distance

curprev 15:1215:12, 11 July 2022‎ Brb talk contribs‎ 57,869 bytes +163‎ →‎OncoPrint

curprev 19:5619:56, 23 June 2022‎ Brb talk contribs‎ 57,706 bytes +32‎ →‎tidyHeatmap

curprev 16:2216:22, 20 June 2022‎ Brb talk contribs‎ 57,674 bytes +71‎ →‎rasterImage
curprev 16:0716:07, 20 June 2022‎ Brb talk contribs‎ 57,603 bytes +426‎ →‎rasterImage

curprev 15:0715:07, 16 June 2022‎ Brb talk contribs‎ 57,177 bytes +264‎ →‎Optimal number of clusters

curprev 09:4509:45, 3 June 2022‎ Brb talk contribs‎ 53,666 bytes +179‎ →‎Benchmark clustering algorithms

curprev 15:3615:36, 24 May 2022‎ Brb talk contribs‎ 53,487 bytes +123‎ →‎Seurat
curprev 15:2815:28, 24 May 2022‎ Brb talk contribs‎ 53,364 bytes +445‎ →‎Dot heatmap

curprev 15:4815:48, 13 May 2022‎ Brb talk contribs‎ 52,919 bytes +240‎ →‎ComplexHeatmap
curprev 11:3211:32, 13 May 2022‎ Brb talk contribs‎ 52,679 bytes +247‎ →‎ComplexHeatmap
curprev 09:1709:17, 13 May 2022‎ Brb talk contribs‎ 52,432 bytes +129‎ →‎heatmaply

curprev 13:1713:17, 10 May 2022‎ Brb talk contribs‎ 52,303 bytes +284‎ →‎Missing data
curprev 13:0013:00, 10 May 2022‎ Brb talk contribs‎ 52,019 bytes +166‎ →‎Generate sequential colors & grDevices::colorRampPalette()

curprev 20:0720:07, 8 May 2022‎ Brb talk contribs‎ 51,853 bytes +443‎ →‎Colors and legend
curprev 20:0020:00, 8 May 2022‎ Brb talk contribs‎ 51,410 bytes +1,723‎ →‎Reorder dendrograms
curprev 14:5614:56, 8 May 2022‎ Brb talk contribs‎ 49,687 bytes +587‎ →‎Wards agglomeration/linkage method

curprev 21:1521:15, 7 May 2022‎ Brb talk contribs‎ 49,100 bytes +222‎ →‎fheatmap

curprev 10:3110:31, 4 May 2022‎ Brb talk contribs‎ 48,878 bytes +67‎ →‎ComplexHeatmap

curprev 16:1816:18, 25 April 2022‎ Brb talk contribs‎ 48,811 bytes +154‎ →‎Correlation matrix

curprev 09:0609:06, 22 February 2022‎ Brb talk contribs‎ 48,657 bytes +144‎ →‎ComplexHeatmap

curprev 10:0110:01, 30 November 2021‎ Brb talk contribs‎ 48,513 bytes +169‎ →‎heatmaply

curprev 22:3822:38, 27 November 2021‎ Brb talk contribs‎ 45,810 bytes +371‎ →‎Sequential colors
curprev 22:3222:32, 27 November 2021‎ Brb talk contribs‎ 45,439 bytes +2‎ →‎display.brewer.pal() and brewer.pal() functions

curprev 14:5114:51, 12 November 2021‎ Brb talk contribs‎ 45,437 bytes +737‎ →‎tidyHeatmap

curprev 23:0223:02, 11 November 2021‎ Brb talk contribs‎ 44,700 bytes +128‎ →‎tidyHeatmap
curprev 22:5722:57, 11 November 2021‎ Brb talk contribs‎ 44,572 bytes −124‎ No edit summary
curprev 22:1222:12, 11 November 2021‎ Brb talk contribs‎ 44,696 bytes +1,410‎ →‎tidyHeatmap

curprev 11:5011:50, 22 October 2021‎ Brb talk contribs‎ 43,286 bytes +534‎ →‎ggplot2 package
curprev 11:0911:09, 22 October 2021‎ Brb talk contribs‎ 42,752 bytes +90‎ →‎Missing data
curprev 10:5010:50, 22 October 2021‎ Brb talk contribs‎ 42,662 bytes +119‎ →‎Self-defined distance/linkage method

curprev 08:2608:26, 19 October 2021‎ Brb talk contribs‎ 42,543 bytes +90‎ →‎Optimal number of clusters

curprev 14:5414:54, 16 October 2021‎ Brb talk contribs‎ 42,453 bytes +276‎ →‎dendextend* package

curprev 14:2614:26, 15 October 2021‎ Brb talk contribs‎ 42,177 bytes +166‎ →‎Dendrogram
curprev 14:2214:22, 15 October 2021‎ Brb talk contribs‎ 42,011 bytes +1‎ →‎dendextend package
curprev 14:2214:22, 15 October 2021‎ Brb talk contribs‎ 42,010 bytes +62‎ →‎dendextend package

curprev 13:4713:47, 2 October 2021‎ Brb talk contribs‎ 41,948 bytes +133‎ →‎Optimal number of clusters
curprev 13:2413:24, 2 October 2021‎ Brb talk contribs‎ 41,815 bytes +124‎ →‎Optimal number of clusters

curprev 11:0811:08, 1 October 2021‎ Brb talk contribs‎ 41,691 bytes +802‎ →‎Optimal number of clusters
curprev 10:5110:51, 1 October 2021‎ Brb talk contribs‎ 40,889 bytes +87‎ →‎Silhouette score/width
curprev 10:5010:50, 1 October 2021‎ Brb talk contribs‎ 40,802 bytes +6‎ →‎Silhouette score/width

curprev 13:3013:30, 30 September 2021‎ Brb talk contribs‎ 40,796 bytes +1‎ →‎Silhouette score/width
curprev 13:2913:29, 30 September 2021‎ Brb talk contribs‎ 40,795 bytes +471‎ →‎Silhouette score/width

curprev 12:2812:28, 27 September 2021‎ Brb talk contribs‎ 40,324 bytes +18‎ →‎Double dipping

curprev 22:4422:44, 25 September 2021‎ Brb talk contribs‎ 40,306 bytes +325‎ →‎Double dipping

curprev 16:4316:43, 16 September 2021‎ Brb talk contribs‎ 38,345 bytes +286‎ →‎Silhouette score/width
curprev 12:5112:51, 16 September 2021‎ Brb talk contribs‎ 38,059 bytes +674‎ →‎Silhouette score/width
curprev 12:4312:43, 16 September 2021‎ Brb talk contribs‎ 37,385 bytes +10‎ →‎Silhouette score/width
curprev 12:1912:19, 16 September 2021‎ Brb talk contribs‎ 37,375 bytes +172‎ →‎Silhouette score/width

curprev 17:0317:03, 14 September 2021‎ Brb talk contribs‎ 37,203 bytes +104‎ No edit summary
curprev 15:5215:52, 14 September 2021‎ Brb talk contribs‎ 37,099 bytes +71‎ →‎Correlation heatmap

curprev 13:1213:12, 1 September 2021‎ Brb talk contribs‎ 37,028 bytes +223‎ →‎Double dipping

curprev 10:2810:28, 31 August 2021‎ Brb talk contribs‎ 36,805 bytes +215‎ →‎Silhouette score/width

curprev 13:4413:44, 23 August 2021‎ Brb talk contribs‎ 36,590 bytes +231‎ →‎Silhouette score/width
curprev 12:4912:49, 23 August 2021‎ Brb talk contribs‎ 36,359 bytes −177‎ →‎Silhouette score/width
curprev 12:4512:45, 23 August 2021‎ Brb talk contribs‎ 36,536 bytes +177‎ →‎Silhouette score/width

curprev 16:0116:01, 16 August 2021‎ Brb talk contribs‎ 36,359 bytes +101‎ →‎Compare 2 clustering methods, ARI
curprev 15:5915:59, 16 August 2021‎ Brb talk contribs‎ 36,258 bytes +5‎ →‎Compare 2 clustering methods

curprev 10:4710:47, 11 August 2021‎ Brb talk contribs‎ 36,253 bytes +95‎ →‎Compare 2 clustering methods
curprev 10:2310:23, 11 August 2021‎ Brb talk contribs‎ 36,158 bytes +47‎ →‎Compare clustering result

curprev 17:1417:14, 10 August 2021‎ Brb talk contribs‎ 36,111 bytes +275‎ →‎Compare clustering result

curprev 16:2416:24, 26 July 2021‎ Brb talk contribs‎ 35,836 bytes +172‎ →‎Silhouette score/width

curprev 15:2815:28, 22 July 2021‎ Brb talk contribs‎ 35,664 bytes +196‎ →‎corrplot

curprev 17:0417:04, 19 June 2021‎ Brb talk contribs‎ 35,468 bytes +70‎ →‎Euclidean distance

curprev 10:2210:22, 11 June 2021‎ Brb talk contribs‎ 35,398 bytes +67‎ →‎Sequential colors
curprev 09:0209:02, 11 June 2021‎ Brb talk contribs‎ 35,331 bytes +150‎ →‎Self-defined distance/linkage method
curprev 08:2608:26, 11 June 2021‎ Brb talk contribs‎ 35,181 bytes +157‎ →‎Hierarchical clustering

curprev 13:1113:11, 9 June 2021‎ Brb talk contribs‎ 35,024 bytes +337‎ →‎Wards agglomeration/linkage method

curprev 22:0622:06, 7 June 2021‎ Brb talk contribs‎ 34,687 bytes +79‎ →‎Silhouette score/width Tags: mobile edit mobile web edit
curprev 13:5413:54, 7 June 2021‎ Brb talk contribs‎ 34,608 bytes +507‎ →‎Wards agglomeration/linkage method

curprev 10:2510:25, 21 May 2021‎ Brb talk contribs‎ 34,101 bytes +529‎ →‎Wards agglomeration/linkage method

curprev 14:2514:25, 19 May 2021‎ Brb talk contribs‎ 33,572 bytes +117‎ →‎Benchmark clustering algorithms

curprev 21:3521:35, 17 May 2021‎ Brb talk contribs‎ 33,455 bytes +800‎ →‎Silhouette score/width
curprev 21:0021:00, 17 May 2021‎ Brb talk contribs‎ 32,655 bytes +6‎ →‎Silhouette score
curprev 20:3420:34, 17 May 2021‎ Brb talk contribs‎ 32,649 bytes +1,327‎ →‎Optimal number of clusters

curprev 18:4518:45, 15 May 2021‎ Brb talk contribs‎ 31,322 bytes +62‎ →‎pheatmap

curprev 16:5716:57, 29 April 2021‎ Brb talk contribs‎ 31,260 bytes +94‎ →‎gplots package and heatmap.2()
curprev 16:3916:39, 29 April 2021‎ Brb talk contribs‎ 31,166 bytes +137‎ →‎gplots package
curprev 16:3216:32, 29 April 2021‎ Brb talk contribs‎ 31,029 bytes +1,155‎ →‎Color labels

curprev 08:4308:43, 27 April 2021‎ Brb talk contribs‎ 29,874 bytes +87‎ →‎pheatmap

curprev 21:2521:25, 25 April 2021‎ Brb talk contribs‎ 29,787 bytes +149‎ →‎Output from heatmap.2 examples
curprev 20:2220:22, 25 April 2021‎ Brb talk contribs‎ 29,638 bytes +69‎ →‎d3heatmap

curprev 15:3815:38, 9 April 2021‎ Brb talk contribs‎ 29,569 bytes +218‎ →‎Heatmap in the terminal

curprev 10:0810:08, 30 March 2021‎ Brb talk contribs‎ 29,351 bytes +1,463‎ →‎Hierarchical clustering

curprev 13:1413:14, 15 March 2021‎ Brb talk contribs‎ 27,888 bytes +35‎ →‎k-means clustering
curprev 12:4812:48, 15 March 2021‎ Brb talk contribs‎ 27,853 bytes +124‎ →‎k-means clustering

curprev 12:3612:36, 10 March 2021‎ Brb talk contribs‎ 27,729 bytes +213‎ →‎Interactive heatmaps

curprev 17:4617:46, 6 February 2021‎ Brb talk contribs‎ 27,516 bytes +154‎ →‎Evaluate the effect of centering & scaling

curprev 11:1711:17, 5 February 2021‎ Brb talk contribs‎ 27,362 bytes +58‎ →‎mbkmeans
curprev 10:4010:40, 5 February 2021‎ Brb talk contribs‎ 27,304 bytes +139‎ →‎k-means clustering

curprev 16:1016:10, 31 January 2021‎ Brb talk contribs‎ 27,165 bytes +140‎ →‎pheatmap

curprev 16:1116:11, 30 January 2021‎ Brb talk contribs‎ 27,025 bytes +341‎ →‎Benchmark clustering algorithms

curprev 22:3822:38, 22 December 2020‎ Brb talk contribs‎ 26,684 bytes +107‎ →‎Dendrogram

curprev 20:1920:19, 13 December 2020‎ Brb talk contribs‎ 26,577 bytes +62‎ →‎ggplot2 package

curprev 21:1421:14, 8 December 2020‎ Brb talk contribs‎ 26,515 bytes +175‎ →‎Papers Tags: mobile edit mobile web edit

curprev 15:2215:22, 5 November 2020‎ Brb talk contribs‎ 26,340 bytes +74‎ →‎dendextend package

curprev 14:4214:42, 30 October 2020‎ Brb talk contribs‎ 26,266 bytes +67‎ →‎Clustering

curprev 11:2511:25, 9 July 2020‎ Brb talk contribs‎ 26,199 bytes +251‎ →‎SubtypeDrug: Prioritization of Candidate Cancer Subtype Specific Drugs

curprev 11:2411:24, 3 July 2020‎ Brb talk contribs‎ 25,948 bytes 0‎ →‎pheatmap
curprev 11:2011:20, 3 July 2020‎ Brb talk contribs‎ 25,948 bytes +125‎ →‎pheatmap

curprev 09:3209:32, 2 July 2020‎ Brb talk contribs‎ 25,823 bytes +139‎ →‎pheatmap

curprev 19:2219:22, 28 May 2020‎ Brb talk contribs‎ 25,684 bytes +62‎ →‎OncoPrint

curprev 12:1212:12, 23 May 2020‎ Brb talk contribs‎ 25,622 bytes +94‎ →‎ComplexHeatmap

curprev 09:5009:50, 23 April 2020‎ Brb talk contribs‎ 25,528 bytes +119‎ →‎OncoPrint
curprev 09:2909:29, 23 April 2020‎ Brb talk contribs‎ 25,409 bytes +88‎ →‎OncoPrint
curprev 09:2609:26, 23 April 2020‎ Brb talk contribs‎ 25,321 bytes +17‎ →‎ComplexHeatmap

curprev 10:4310:43, 22 January 2020‎ Brb talk contribs‎ 25,304 bytes +118‎ →‎Colors

curprev 10:3310:33, 15 January 2020‎ Brb talk contribs‎ 25,186 bytes +33‎ →‎dendextend package
curprev 10:3210:32, 15 January 2020‎ Brb talk contribs‎ 25,153 bytes +134‎ →‎dendextend package
curprev 10:2810:28, 15 January 2020‎ Brb talk contribs‎ 25,019 bytes +44‎ →‎Hierarchical clustering

curprev 09:1409:14, 11 October 2019‎ Brb talk contribs‎ 24,975 bytes +173‎ →‎pheatmap
curprev 09:0109:01, 11 October 2019‎ Brb talk contribs‎ 24,802 bytes +159‎ →‎Papers
curprev 08:5708:57, 11 October 2019‎ Brb talk contribs‎ 24,643 bytes +227‎ →‎pheatmap
curprev 08:4808:48, 11 October 2019‎ Brb talk contribs‎ 24,416 bytes +103‎ →‎pheatmap

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